Package: ctrlGene 1.0.1
Shanliang Zhong
ctrlGene: Assess the Stability of Candidate Housekeeping Genes
A simple way to assess the stability of candidate housekeeping genes is implemented in this package.
Authors:
ctrlGene_1.0.1.tar.gz
ctrlGene_1.0.1.tar.gz(r-4.5-noble)ctrlGene_1.0.1.tar.gz(r-4.4-noble)
ctrlGene_1.0.1.tgz(r-4.4-emscripten)ctrlGene_1.0.1.tgz(r-4.3-emscripten)
ctrlGene.pdf |ctrlGene.html✨
ctrlGene/json (API)
| # Install 'ctrlGene' in R: |
| install.packages('ctrlGene', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org')) |
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated 5 years agofrom:735bf747ff. Checks:OK: 2. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Nov 05 2024 |
| R-4.5-linux | OK | Nov 05 2024 |
Exports:bestKeeperbkicpStageNormgeNorm2measureMpairwiseVpearsonCorplotMplotV
Dependencies:GPArotationlatticemnormtnlmepsych
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Determines stability of genes | bestKeeper |
| Analyzes genes versus BestKeeper index | bki |
| Calculates descriptive statistics | cpSta |
| Reload Saved Datasets | FIB |
| Reload Saved Datasets | FIBct |
| Ranks genes | geNorm |
| Ranks genes | geNorm2 |
| Calculates measure M | measureM |
| Calculates V(n+1/n) values | pairwiseV |
| Analyzes pair-wise correlation | pearsonCor |
| Plots average M of remaining genes | plotM |
| Plots V(n+1/n) values | plotV |