Package: ctrlGene 1.0.1
Shanliang Zhong
ctrlGene: Assess the Stability of Candidate Housekeeping Genes
A simple way to assess the stability of candidate housekeeping genes is implemented in this package.
Authors:
ctrlGene_1.0.1.tar.gz
ctrlGene_1.0.1.zip(r-4.7-any)ctrlGene_1.0.1.zip(r-4.6-any)
ctrlGene_1.0.1.tar.gz(r-4.7-any)ctrlGene_1.0.1.tar.gz(r-4.6-any)
ctrlGene_1.0.1.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
ctrlGene/json (API)
| # Install 'ctrlGene' in R: |
| install.packages('ctrlGene', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org')) |
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated from:735bf747ff. Checks:6 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel | OK | 88 | ||
| source / vignettes | OK | 173 | ||
| linux-release | OK | 89 | ||
| windows-devel | OK | 61 | ||
| windows-release | OK | 83 | ||
| wasm-release | OK | 78 |
Exports:bestKeeperbkicpStageNormgeNorm2measureMpairwiseVpearsonCorplotMplotV
Dependencies:GPArotationlatticemnormtnlmepsych
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Determines stability of genes | bestKeeper |
| Analyzes genes versus BestKeeper index | bki |
| Calculates descriptive statistics | cpSta |
| Reload Saved Datasets | FIB |
| Reload Saved Datasets | FIBct |
| Ranks genes | geNorm |
| Ranks genes | geNorm2 |
| Calculates measure M | measureM |
| Calculates V(n+1/n) values | pairwiseV |
| Analyzes pair-wise correlation | pearsonCor |
| Plots average M of remaining genes | plotM |
| Plots V(n+1/n) values | plotV |