Package: corTest 1.0.7

Danyang Yu

corTest: Robust Tests for Equal Correlation

There are 6 novel robust tests for equal correlation. They are all based on logistic regressions. The score statistic U is proportion to difference of two correlations based on different types of correlation in 6 methods. The ST1() is based on Pearson correlation. ST2() improved ST1() by using median absolute deviation. ST3() utilized type M correlation and ST4() used Spearman correlation. ST5() and ST6() used two different ways to combine ST3() and ST4(). We highly recommend ST5() according to the article titled ''New Statistical Methods for Constructing Robust Differential Correlation Networks to characterize the interactions among microRNAs'' published in Scientific Reports. Please see the reference: Yu et al. (2019) <doi:10.1038/s41598-019-40167-8>.

Authors:Danyang Yu, Weiliang Qiu, Zeyu Zhang, Kimberly Glass, Jessica Su, Dawn L. DeMeo, Kelan Tantisira, Scott T. Weiss

corTest_1.0.7.tar.gz
corTest_1.0.7.tar.gz(r-4.5-noble)corTest_1.0.7.tar.gz(r-4.4-noble)
corTest_1.0.7.tgz(r-4.4-emscripten)corTest_1.0.7.tgz(r-4.3-emscripten)
corTest.pdf |corTest.html
corTest/json (API)
NEWS

# Install 'corTest' in R:
install.packages('corTest', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Datasets:
  • es - A BioConductor ExpressionSet Object Storing Gene Expression Data

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

1.00 score 10 scripts 285 downloads 1 mentions 12 exports 34 dependencies

Last updated 4 years agofrom:053fbe7df7. Checks:OK: 1 NOTE: 1. Indexed: yes.

TargetResultDate
Doc / VignettesOKNov 21 2024
R-4.5-linuxNOTENov 21 2024

Exports:construct_networkfisher_transfer_testgenerate_datagenEsetghdistplotDiffCorst1st2st3st4st5st6

Dependencies:BiobaseBiocGenericscliclusterGenerationcolorspacecpp11fansifarvergenericsggplot2gluegtableigraphisobandlabelinglatticelifecyclemagrittrMASSMatrixmgcvmunsellnlmepillarpkgconfigR6RColorBrewerrlangscalestibbleutf8vctrsviridisLitewithr