Package: corMLPE 0.1.0

Bill Peterman

corMLPE: Correlation Structures for Symmetric Relational Data

Implements correlation structures for symmetric relational data (e.g. pairwise distances and dissimilarities) that interface with models using 'nlme'-style correlation structures. The maximum likelihood population effects method is described by Clarke et al. (2002) <doi:10.1198/108571102320>.

Authors:Nathaniel Pope [aut], Bill Peterman [aut, cre]

corMLPE_0.1.0.tar.gz
corMLPE_0.1.0.tar.gz(r-4.7-arm64)corMLPE_0.1.0.tar.gz(r-4.7-x86_64)corMLPE_0.1.0.tar.gz(r-4.6-arm64)corMLPE_0.1.0.tar.gz(r-4.6-x86_64)
corMLPE_0.1.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
corMLPE/json (API)

# Install 'corMLPE' in R:
install.packages('corMLPE', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org'))
Uses libs:
  • openblas– Optimized BLAS
  • c++– GNU Standard C++ Library v3
  • openmp– GCC OpenMP (GOMP) support library

On CRAN:

Conda:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

openblascppopenmp

1.00 score 7 exports 6 dependencies

Last updated from:14d48137ec. Checks:6 OK. Indexed: no.

TargetResultTimeFilesSyslog
linux-devel-arm64OK186
linux-devel-x86_64OK146
source / vignettesOK188
linux-release-arm64OK154
linux-release-x86_64OK155
wasm-releaseOK122

Exports:corMaternMLPEcorMLPEcorNMLPEcorNMLPE2simulate_corMLPE_residualssimulate_IBD_corMLPEt

Dependencies:latticeMASSMatrixnlmeRcppRcppArmadillo

Readme and manuals

Help Manual

Help pageTopics
Correlation Structure for Grouped Matern MLPE Modelsas.matrix.corMaternMLPE corMaternMLPE
Correlation structure for symmetric relational dataas.matrix.corMLPE corMLPE
Correlation Structure for Clustered NMLPE Modelsas.matrix.corNMLPE corNMLPE
Correlation Structure for Reduced-Basis NMLPE Modelsas.matrix.corNMLPE2 corNMLPE2
Methods for Internal `dgCMatrix_corMLPE` ObjectsdgCMatrix_corMLPE-methods t,dgCMatrix_corMLPE-method [,dgCMatrix_corMLPE,index,missing,logical-method [,dgCMatrix_corMLPE,missing,index,logical-method
Simulate data from a fitted corMLPE modelsimulate_corMLPE_residuals
Simulate data from an isolation-by-distance model with MLPE correlation structuresimulate_IBD_corMLPE