Package: colorednoise 1.1.2

July Pilowsky

colorednoise: Simulate Temporally Autocorrelated Populations

Temporally autocorrelated populations are correlated in their vital rates (growth, death, etc.) from year to year. It is very common for populations, whether they be bacteria, plants, or humans, to be temporally autocorrelated. This poses a challenge for stochastic population modeling, because a temporally correlated population will behave differently from an uncorrelated one. This package provides tools for simulating populations with white noise (no temporal autocorrelation), red noise (positive temporal autocorrelation), and blue noise (negative temporal autocorrelation). The algebraic formulation for autocorrelated noise comes from Ruokolainen et al. (2009) <doi:10.1016/j.tree.2009.04.009>. Models for unstructured populations and for structured populations (matrix models) are available.

Authors:July Pilowsky [aut, cre]

colorednoise_1.1.2.tar.gz
colorednoise_1.1.2.tar.gz(r-4.5-noble)colorednoise_1.1.2.tar.gz(r-4.4-noble)
colorednoise_1.1.2.tgz(r-4.4-emscripten)colorednoise_1.1.2.tgz(r-4.3-emscripten)
colorednoise.pdf |colorednoise.html
colorednoise/json (API)
NEWS

# Install 'colorednoise' in R:
install.packages('colorednoise', repos = 'https://cloud.r-project.org')

Bug tracker:https://github.com/japilo/colorednoise/issues

Uses libs:
  • openblas– Optimized BLAS
  • c++– GNU Standard C++ Library v3

On CRAN:

Conda:

openblascpp

2.95 score 18 scripts 431 downloads 1 mentions 9 exports 10 dependencies

Last updated 1 years agofrom:93c8eaa13c. Checks:1 OK, 1 NOTE. Indexed: no.

TargetResultLatest binary
Doc / VignettesOKFeb 23 2025
R-4.5-linux-x86_64NOTEFeb 23 2025

Exports:autocorr_simautocorrelationcolored_multi_rnormcolored_noisecor2covmatrix_modelmulti_rnormstdev_transformunstructured_pop

Dependencies:clidata.tablegluelifecyclemagrittrpurrrRcppRcppArmadillorlangvctrs

Estimating Autocorrelation of Colored Noise

Rendered fromnoise.Rmdusingknitr::rmarkdownon Feb 23 2025.

Last update: 2024-02-29
Started: 2017-10-10