This package is considered a duplicate. The official version of this package is found at:https://jakobraymaekers.r-universe.dev/cellWise

Package: cellWise 2.5.3

Jakob Raymaekers

cellWise: Analyzing Data with Cellwise Outliers

Tools for detecting cellwise outliers and robust methods to analyze data which may contain them. Contains the implementation of the algorithms described in Rousseeuw and Van den Bossche (2018) <doi:10.1080/00401706.2017.1340909> (open access) Hubert et al. (2019) <doi:10.1080/00401706.2018.1562989> (open access), Raymaekers and Rousseeuw (2021) <doi:10.1080/00401706.2019.1677270> (open access), Raymaekers and Rousseeuw (2021) <doi:10.1007/s10994-021-05960-5> (open access), Raymaekers and Rousseeuw (2021) <doi:10.52933/jdssv.v1i3.18> (open access), Raymaekers and Rousseeuw (2022) <arxiv:2207.13493> (open access) Rousseeuw (2022) <doi:10.1016/j.ecosta.2023.01.007> (open access). Examples can be found in the vignettes: "DDC_examples", "MacroPCA_examples", "wrap_examples", "transfo_examples", "DI_examples", "cellMCD_examples" , "Correspondence_analysis_examples", and "cellwise_weights_examples".

Authors:Jakob Raymaekers [aut, cre], Peter Rousseeuw [aut], Wannes Van den Bossche [ctb], Mia Hubert [ctb]

cellWise_2.5.3.tar.gz
cellWise_2.5.3.tar.gz(r-4.5-noble)cellWise_2.5.3.tar.gz(r-4.4-noble)
cellWise_2.5.3.tgz(r-4.4-emscripten)cellWise_2.5.3.tgz(r-4.3-emscripten)
cellWise.pdf |cellWise.html✨
cellWise/json (API)

# Install 'cellWise' in R:

install.packages('cellWise', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org'))

Uses libs:

openblas– Optimized BLAS
c++– GNU Standard C++ Library v3
openmp– GCC OpenMP (GOMP) support library

Datasets:

data_VOC - VOC dataset
data_brands - The brands dataset
data_clothes - The clothes dataset
data_dogWalker - Dog walker dataset
data_dposs - DPOSS dataset
data_glass - The glass dataset
data_mortality - The mortality dataset
data_personality_traits - The personality traits data
data_philips - The philips dataset

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

openblas cpp openmp

5.92 score 2 stars 16 packages 54 scripts 808 downloads 2 mentions 23 exports 43 dependencies

Last updated 1 years agofrom:2d8d62a07c. Checks:OK: 2. Indexed: no.

Target	Result	Date
Doc / Vignettes	OK	Dec 30 2024
R-4.5-linux-x86_64	OK	Dec 30 2024

Exports:cellHandler cellMap cellMCD checkDataSet cwLocScat DDC DDCpredict DI estLocScale generateCorMat generateData ICPCA MacroPCA MacroPCApredict outlierMap plot_cellMCD transfo transfo_newdata transfo_transformback truncPC unpack weightedEM wrap

Dependencies:cli colorspace DEoptimR fansi farver ggplot2 glue gridExtra gtable isoband labeling lattice lifecycle magrittr MASS Matrix matrixStats mgcv munsell mvtnorm nlme pcaPP pillar pkgconfig plyr R6 RColorBrewer Rcpp RcppArmadillo reshape2 rlang robustbase rrcov scales shape stringi stringr svd tibble utf8 vctrs viridisLite withr

cellMCD examples

Raymaekers, J. and Rousseeuw, P.J.

Rendered fromcellMCD_examples.Rmdusingknitr::knitron Dec 30 2024.

Last update: 2023-10-25
Started: 2022-08-10

cellwise weights examples

Rousseeuw, P.J.

Rendered fromcellwise_weights_examples.Rmdusingknitr::knitron Dec 30 2024.

Last update: 2023-10-25
Started: 2022-12-11

Correspondence analysis examples

Raymaekers, J. and Rousseeuw, P.J.

Rendered fromCorrespondence_analysis_examples.Rmdusingknitr::knitron Dec 30 2024.

Last update: 2023-10-25
Started: 2022-12-11

DDC examples

Raymaekers, J. and Rousseeuw, P.J.

Rendered fromDDC_examples.Rmdusingknitr::knitron Dec 30 2024.

Last update: 2023-10-25
Started: 2016-12-07

DI examples

Raymaekers, J. and Rousseeuw, P.J.

Rendered fromDI_examples.Rmdusingknitr::knitron Dec 30 2024.

Last update: 2023-10-25
Started: 2020-12-03

MacroPCA examples

Raymaekers, J. and Rousseeuw, P.J.

Rendered fromMacroPCA_examples.Rmdusingknitr::knitron Dec 30 2024.

Last update: 2023-10-25
Started: 2019-02-25

transfo examples

Raymaekers, J. and Rousseeuw, P.J.

Rendered fromtransfo_examples.Rmdusingknitr::knitron Dec 30 2024.

Last update: 2023-10-25
Started: 2020-11-11

wrap examples

Raymaekers, J. and Rousseeuw, P.J.

Rendered fromwrap_examples.Rmdusingknitr::knitron Dec 30 2024.

Last update: 2023-10-25
Started: 2021-03-09

Citation

Readme and manuals

Help Manual

Help page	Topics
cellHandler algorithm	cellHandler
Draw a cellmap	cellMap
cellWise minimum covariance determinant estimator	cellMCD
Clean the dataset	checkDataSet
Estimate location and scatter of data with cellwise weights	cwLocScat
The brands dataset	data_brands
The clothes dataset	data_clothes
Dog walker dataset	data_dogWalker
DPOSS dataset	data_dposs
The glass dataset	data_glass
The mortality dataset	data_mortality
The personality traits data	data_personality_traits
The philips dataset	data_philips
VOC dataset	data_VOC
Detect Deviating Cells	DDC
DDCpredict	DDCpredict
Detection-Imputation algorithm	DI
Estimate robust location and scale	estLocScale
Generates correlation matrices	generateCorMat
Generates artificial datasets with outliers	generateData
Iterative Classical PCA	ICPCA
MacroPCA	MacroPCA
MacroPCApredict	MacroPCApredict
Plot the outlier map.	outlierMap
Draw plots based on the cellwise minimum covariance determinant estimator cellMCD	plot_cellMCD
Robustly fit the Box-Cox or Yeo-Johnson transformation	transfo
Transform variables based on the output of 'transfo'.	transfo_newdata
Backtransform variables based on the output of 'transfo'.	transfo_transformback
Classical Principal Components by truncated SVD.	truncPC
Unpacks cellwise weighted data	unpack
Estimates location and scatter on incomplete data with case weights	weightedEM
Wrap the data.	wrap

Package: cellWise 2.5.3

cellWise: Analyzing Data with Cellwise Outliers

cellMCD examples

cellwise weights examples

Correspondence analysis examples

DDC examples

DI examples

MacroPCA examples

transfo examples

wrap examples

Citation

Readme and manuals

Help Manual

Usage by other packages (reverse dependencies)