Package: blendR 1.0.0

Zhaojing Che
blendR: Blended Survival Curves
Create a blended curve from two survival curves, which is particularly useful for survival extrapolation in health technology assessment. The main idea is to mix a flexible model that fits the observed data well with a parametric model that encodes assumptions about long-term survival. The two curves are blended into a single survival curve that is identical to the first model over the range of observed times and gradually approaches the parametric model over the extrapolation period based on a given weight function. This approach allows for the inclusion of external information, such as data from registries or expert opinion, to guide long-term extrapolations, especially when dealing with immature trial data. See Che et al. (2022) <doi:10.1177/0272989X221134545>.
Authors:
blendR_1.0.0.tar.gz
blendR_1.0.0.tar.gz(r-4.7-any)blendR_1.0.0.tar.gz(r-4.6-any)
blendR_1.0.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
blendR/json (API)
NEWS
| # Install 'blendR' in R: |
| install.packages('blendR', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/statisticshealtheconomics/blendr/issues
Pkgdown/docs site:https://statisticshealtheconomics.github.io
- dat_FCR - Survival data
Last updated from:df5b4bb9f3. Checks:2 ERROR, 2 OK. Indexed: no.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-x86_64 | ERROR | 664 | ||
| source / vignettes | OK | 666 | ||
| linux-release-x86_64 | ERROR | 761 | ||
| wasm-release | OK | 870 |
Exports:blendsurvext_surv_simfit_inla_pwmake_survweightplot
Dependencies:assertthatbackportsbase64encbbmlebdsmatrixbslibcachemcheckmatecliclustercodetoolscolorspacecpp11data.tabledeSolvedigestdplyrevaluatefarverfastGHQuadfastmapflexsurvfontawesomeforeignFormulafsgenericsggplot2gluegridExtragtablehighrHmischtmlTablehtmltoolshtmlwidgetsisobandjquerylibjsonliteknitrlabelinglatticelifecyclelsodamagrittrmanipulateMASSMatrixMatrixModelsmemoisemgcvmimemnormtmstatemuhazmultcompmvtnormnlmennetnumDerivpillarpkgconfigpolsplinepurrrquadprogquantregR6rappdirsRColorBrewerRcppRcppArmadillorJavarlangrmarkdownrmsrpartrstpm2rstudioapiS7sandwichsassscalessnSparseMstatmodstringistringrsurvHEsurvivalTH.datatibbletidyrtidyselecttinytexutf8vctrsviridisLitewithrxfunxlsxxlsxjarsyamlzoo
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Blended survival object | blendsurv |
| Survival data | dat_FCR |
| Create an external survival data based on expert opinion | ext_surv_sim |
| Generate survival estimates with a piecewise exponential Cox model (using INLA) | fit_inla_pw |
| Create survival probabilities | make_surv make_surv.default make_surv.flexsurvreg make_surv.inla make_surv.survHE make_surv_methods |
| Blended survival plot with manipulate | manip_plot |
| Blended survival curve based on short-term data and external information | plot.blended |
| Plots the weights for the blending procedure | weightplot |