Package: bipd 0.3

Michael Seo

bipd: Bayesian Individual Patient Data Meta-Analysis using 'JAGS'

We use a Bayesian approach to run individual patient data meta-analysis and network meta-analysis using 'JAGS'. The methods incorporate shrinkage methods and calculate patient-specific treatment effects as described in Seo et al. (2021) <doi:10.1002/sim.8859>. This package also includes user-friendly functions that impute missing data in an individual patient data using mice-related packages.

Authors:Michael Seo [aut, cre]

bipd_0.3.tar.gz
bipd_0.3.tar.gz(r-4.5-noble)bipd_0.3.tar.gz(r-4.4-noble)
bipd_0.3.tgz(r-4.4-emscripten)bipd_0.3.tgz(r-4.3-emscripten)
bipd.pdf |bipd.html
bipd/json (API)
NEWS

# Install 'bipd' in R:
install.packages('bipd', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Uses libs:
  • jags– Just Another Gibbs Sampler for Bayesian MCMC
  • c++– GNU Standard C++ Library v3

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

jagscpp

2.48 score 20 scripts 285 downloads 12 exports 20 dependencies

Last updated 3 years agofrom:2cf2e43566. Checks:OK: 2. Indexed: no.

TargetResultDate
Doc / VignettesOKDec 10 2024
R-4.5-linuxOKDec 10 2024

Exports:add.mcmcfindMissingPatterngenerate_ipdma_examplegenerate_ipdnma_examplegenerate_sysmiss_ipdma_exampleipd.runipd.run.parallelipdma.imputeipdma.model.deft.onestageipdma.model.onestageipdnma.model.onestagetreatment.effect

Dependencies:clicodadplyrfansigenericsgluelatticelifecyclemagrittrmvtnormpillarpkgconfigR6rjagsrlangtibbletidyselectutf8vctrswithr

Imputing missing values in IPD

Rendered fromImputing-missing-values-in-IPD.Rmdusingknitr::rmarkdownon Dec 10 2024.

Last update: 2022-01-26
Started: 2022-01-26

IPD meta-analysis

Rendered fromIPD-meta-analysis.Rmdusingknitr::rmarkdownon Dec 10 2024.

Last update: 2022-06-05
Started: 2022-01-26

IPD meta-analysis-with-missing-data

Rendered fromIPD-meta-analysis-with-missing-data.Rmdusingknitr::rmarkdownon Dec 10 2024.

Last update: 2022-06-05
Started: 2022-06-05