Package: bexy 0.1.3
Madleina Caduff
bexy: Visualize and Parse the Output of 'BeXY'
Provides functions for summarizing and plotting the output of the command-line tool 'BeXY' (<https://bitbucket.org/wegmannlab/bexy>), a tool that performs Bayesian inference of sex chromosome karyotypes and sex-linked scaffolds from low-depth sequencing data.
Authors:
bexy_0.1.3.tar.gz
bexy_0.1.3.tar.gz(r-4.5-noble)bexy_0.1.3.tar.gz(r-4.4-noble)
bexy_0.1.3.tgz(r-4.4-emscripten)bexy_0.1.3.tgz(r-4.3-emscripten)
bexy.pdf |bexy.html✨
bexy/json (API)
NEWS
# Install 'bexy' in R: |
install.packages('bexy', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org')) |
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated 4 months agofrom:96d2546ca9. Checks:OK: 2. Indexed: yes.
Target | Result | Date |
---|---|---|
Doc / Vignettes | OK | Dec 22 2024 |
R-4.5-linux | OK | Dec 22 2024 |
Exports:bexygetPosteriorMeanRhogetPosteriorModeAutosomalTrisomygetPosteriorModeScaffoldTypesgetPosteriorModeSexKaryotypesgetSamplesWithAutosomalTrisomygetSamplesWithThisKaryotypegetScaffoldsWithThisTypeplot.bexyplotAutosomalTrisomyplotAutosomalTrisomyCountsplotAutosomalTrisomyPosteriorProbabilitiesplotBarsplotCountsplotMCMCTraceplotTernaryprint.bexysummary.bexywritePosteriorModeAutosomalTrisomieswritePosteriorModeScaffoldTypeswritePosteriorModeSexKaryotypes
Dependencies:base64encbslibcachemclicommonmarkcrayondigestfastmapfontawesomefsgluehtmltoolshttpuvjquerylibjsonlitelaterlatticelifecyclemagrittrmemoisemimePlotToolspromisesR6rappdirsRcppRcppHungarianrlangsassshinysourcetoolsspTeachingDemosTernarywithrxtable