Installation | Usage | Available organisms or species | Organs in a single organism | Cell types within an organ | Gene expression | Markers | Finding cells that highly express a gene | Finding similar features | Data sources
Package: atlasapprox 0.1.0
Ying Xu
atlasapprox: Cell Atlas Approximations
Provides an interface in R to cell atlas approximations. See the vignette under "Getting started" for instructions. You can also explore the reference documentation for specific functions. Additional interfaces and resources are available at <https://atlasapprox.readthedocs.io>.
Authors:
atlasapprox_0.1.0.tar.gz
atlasapprox_0.1.0.tar.gz(r-4.7-any)atlasapprox_0.1.0.tar.gz(r-4.6-any)
atlasapprox_0.1.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
atlasapprox/json (API)
| # Install 'atlasapprox' in R: |
| install.packages('atlasapprox', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/fabilab/cell_atlas_approximations_api/issues
Last updated from:9094bd71db. Checks:4 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-x86_64 | OK | 116 | ||
| source / vignettes | OK | 179 | ||
| linux-release-x86_64 | OK | 506 | ||
| wasm-release | OK | 115 |
Exports:GetAverageGetCelltypeLocationGetCelltypesGetDataSourcesGetFeaturesGetFractionDetectedGetHighestMeasurementGetMarkersGetOrganismsGetOrgansGetSimilarFeatures
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| api_version | api_version |
| GetAverage | GetAverage |
| GetCelltypeLocation | GetCelltypeLocation |
| GetCelltypes | GetCelltypes |
| GetDataSources | GetDataSources |
| GetFeatures | GetFeatures |
| GetFractionDetected | GetFractionDetected |
| GetHighestMeasurement | GetHighestMeasurement |
| GetMarkers | GetMarkers |
| GetOrganisms | GetOrganisms |
| GetOrgans | GetOrgans |
| GetSimilarFeatures | GetSimilarFeatures |