Package: ammiBayes 1.0-2
Fabio M. Correa
ammiBayes: Bayesian Ammi Model for Continuous Data
Flexible multi-environment trials analysis via MCMC method for Additive Main Effects and Multiplicative Model (AMMI) for continuous data. Biplot with the averages and regions of confidence can be generated. The chains run in parallel on Linux systems and run serially on Windows.
Authors:
ammiBayes_1.0-2.tar.gz
ammiBayes_1.0-2.tar.gz(r-4.5-noble)ammiBayes_1.0-2.tar.gz(r-4.4-noble)
ammiBayes_1.0-2.tgz(r-4.4-emscripten)ammiBayes_1.0-2.tgz(r-4.3-emscripten)
ammiBayes.pdf |ammiBayes.html✨
ammiBayes/json (API)
| # Install 'ammiBayes' in R: |
| install.packages('ammiBayes', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org')) |
- ammiData - Dataset for example
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated 10 months agofrom:d1fc810cae. Checks:OK: 1 NOTE: 1. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Oct 30 2024 |
| R-4.5-linux | NOTE | Oct 30 2024 |
Exports:ammiBayesammiBayes.conf.plotammiBayes.gen.plotammiBayes.mean.plotdiagnosis.ammiBayesgen.effectspredict.ammiBayessummary.ammiBayes
Dependencies:abindbackportsbase64encbayesplotbslibcachemcheckmatecliclueclustercodacolorspacedata.tabledeldirdigestdistfree.crdistributionaldotCall64dplyrevaluateexpmfansifarverfastmapfontawesomeforeignFormulafsgenericsggplot2ggridgesgluegridExtragtablehighrHmischtmlTablehtmltoolshtmlwidgetsinterpisobandjpegjquerylibjsonliteknitrlabelinglatticelatticeExtralifecyclemagrittrMASSMatrixmatrixStatsmemoisemgcvmimemovMFmsmmunsellmvtnormnlmennetnumDerivpillarpkgconfigplyrpngposteriorR6rappdirsRColorBrewerRcppRcppEigenreshape2rlangrmarkdownrpartrstudioapisassscalesskmeansslamspamstringistringrsurvivaltensorAtibbletidyselecttinytexutf8vctrsviridisviridisLitewithrxfunyaml
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Bayesian AMMI for continuous data | ammiBayes |
| Plot ammiBayes object with confidence region | ammiBayes.conf.plot |
| Plot genotype effects from ammiBayes object | ammiBayes.gen.plot |
| Plot ammiBayes object | ammiBayes.mean.plot |
| Dataset for example | ammiData |
| Bayesian AMMI for ordinal data | diagnosis.ammiBayes |
| Bayesian AMMI for continous data | gen.effects |
| Bayesian AMMI for continuous data | predict.ammiBayes |
| Summary Method for ammiBayes object | summary.ammiBayes |