Package: amadeus 1.2.3
amadeus: Accessing and Analyzing Large-Scale Environmental Data
Functions are designed to facilitate access to and utility with large scale, publicly available environmental data in R. The package contains functions for downloading raw data files from web URLs (download_data()), processing the raw data files into clean spatial objects (process_covariates()), and extracting values from the spatial data objects at point and polygon locations (calculate_covariates()). These functions call a series of source-specific functions which are tailored to each data sources/datasets particular URL structure, data format, and spatial/temporal resolution. The functions are tested, versioned, and open source and open access. For sum_edc() method details, see Messier, Akita, and Serre (2012) <doi:10.1021/es203152a>.
Authors:
amadeus_1.2.3.tar.gz
amadeus_1.2.3.tar.gz(r-4.5-noble)amadeus_1.2.3.tar.gz(r-4.4-noble)
amadeus_1.2.3.tgz(r-4.4-emscripten)amadeus_1.2.3.tgz(r-4.3-emscripten)
amadeus.pdf |amadeus.html✨
amadeus/json (API)
NEWS
# Install 'amadeus' in R: |
install.packages('amadeus', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/niehs/amadeus/issues
Pkgdown site:https://niehs.github.io
Last updated 1 months agofrom:3437f2420f. Checks:1 OK, 1 NOTE. Indexed: no.
Target | Result | Latest binary |
---|---|---|
Doc / Vignettes | OK | Feb 16 2025 |
R-4.5-linux | NOTE | Feb 16 2025 |
Exports:apply_extentas_mysftimecalc_check_timecalc_messagecalc_prepare_locscalc_return_locscalc_setcolumnscalc_timecalc_workercalculate_covariatescalculate_ecoregioncalculate_geoscalculate_gmtedcalculate_gridmetcalculate_groadscalculate_hmscalculate_koppen_geigercalculate_laggedcalculate_merra2calculate_modiscalculate_modis_dailycalculate_narrcalculate_neicalculate_nlcdcalculate_populationcalculate_temporal_dummiescalculate_terraclimatecalculate_tricheck_destfilecheck_for_null_parameterscheck_geomcheck_mysfcheck_mysftimecheck_url_statuscheck_urlsdownload_aqsdownload_cropscapedownload_datadownload_ecoregiondownload_epa_certificatedownload_geosdownload_gmteddownload_gridmetdownload_groadsdownload_hashdownload_hmsdownload_hucdownload_koppen_geigerdownload_merra2download_modisdownload_narrdownload_neidownload_nlcddownload_permitdownload_populationdownload_prismdownload_remove_commanddownload_remove_zipsdownload_rundownload_sanitize_pathdownload_setup_dirdownload_sinkdownload_terraclimatedownload_tridownload_unzipdt_as_mysftimeextract_urlsgenerate_date_sequencegenerate_time_sequenceis_date_propernarr_variableprocess_aqsprocess_blackmarbleprocess_blackmarble_cornersprocess_collectionprocess_conformityprocess_covariatesprocess_cropscapeprocess_ecoregionprocess_flatten_sdsprocess_geosprocess_gmtedprocess_gmted_codesprocess_gridmetprocess_gridmet_codesprocess_groadsprocess_hmsprocess_hucprocess_koppen_geigerprocess_locs_radiusprocess_locs_vectorprocess_merra2process_merra2_timeprocess_modis_mergeprocess_modis_sdsprocess_modis_swathprocess_modis_warpprocess_narrprocess_neiprocess_nlcdprocess_populationprocess_prismprocess_sedac_codesprocess_terraclimateprocess_terraclimate_codesprocess_triprocess_variable_codesread_commandsrename_timesf_as_mysftimesftime_as_mysftimesftime_as_sfsftime_as_spatrastersftime_as_spatrdssftime_as_spatvectorspatraster_as_sftimespatrds_as_sftimespatvector_as_sftimesum_edctest_download_functions
Dependencies:abindarchivearrowaskpassassertthatbitbit64briocachemcallrclassclassIntclicliprcollapsecpp11crayoncurldata.tabledataRetrievalDBIdescdiffobjdigestdplyre1071evaluateexactextractrfansifastmapfsfstfstcoregenericsgluehmshttrhydroloomjsonliteKernSmoothlatticelifecyclelubridatemagrittrmaplegendmapsfmaptilesMASSmemoisemimenhdplusToolsopensslpbapplypillarpkgbuildpkgconfigpkgloadpngpraiseprettyunitsprocessxprogressproxypspurrrR.methodsS3R.ooR.utilsR6RANNrasterrbibutilsRcppRdpackreadrrlangrprojrootrvests2selectrsfsftimeslippymathspstarsstringistringrsysterratestthattibbletidyrtidyselecttimechangetzdbunitsutf8vctrsvroomwaldowithrwkxml2zip
Climatology Lab gridMET
Rendered fromgridmet_workflow.Rmd
usingknitr::rmarkdown
on Feb 16 2025.Last update: 2025-01-08
Started: 2025-01-08
Climatology Lab TerraClimate
Rendered fromterraclimate_workflow.Rmd
usingknitr::rmarkdown
on Feb 16 2025.Last update: 2025-01-08
Started: 2025-01-08
North American Regional Reanalysis (NARR)
Rendered fromnarr_workflow.Rmd
usingknitr::rmarkdown
on Feb 16 2025.Last update: 2025-01-08
Started: 2025-01-08