Package: actisomni 0.2.0

John Muschelli

actisomni: Create Sleep Measures of Actigraphy and Activity Analysis

Estimates sleep from wrist accelerometry and epoch-level activity data. Implements sleep-period-time guiders based on angle changes, posture, least-active periods, sustained inactivity, low activity, and diary or fixed time windows; combines guider windows with sustained-inactivity bouts to produce sleep/wake labels and consensus estimates. Provides diary helpers and Tudor-Locke sleep-period summaries, and interfaces to the 'asleep' and 'sleeper' machine-learning estimators. The angle-based and sustained-inactivity methods are described by van Hees et al. (2015) <doi:10.1371/journal.pone.0142533> and van Hees et al. (2018) <doi:10.1038/s41598-018-31266-z>; the sleep-period summary method by Tudor-Locke et al. (2014) <doi:10.1139/apnm-2013-0173>; and the model estimators by Yuan et al. (2024) <doi:10.1038/s41746-024-01065-0> and Sundararajan et al. (2021) <doi:10.1038/s41598-020-79217-x>.

Authors:John Muschelli [aut, cre]

actisomni_0.2.0.tar.gz
actisomni_0.2.0.zip(r-4.7-any)actisomni_0.2.0.zip(r-4.6-any)
actisomni_0.2.0.tar.gz(r-4.7-any)actisomni_0.2.0.tar.gz(r-4.6-any)
actisomni_0.2.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
actisomni/json (API)

# Install 'actisomni' in R:
install.packages('actisomni', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/jhuwit/actisomni/issues

Pkgdown/docs site:https://jhuwit.github.io

On CRAN:

Conda:

1.70 score 3 scripts 21 exports 80 dependencies

Last updated from:b95e459a70. Checks:6 OK. Indexed: no.

TargetResultTimeFilesSyslog
linux-develOK203
source / vignettesOK247
linux-releaseOK185
windows-develOK203
windows-releaseOK223
wasm-releaseOK139

Exports:acti_asleepacti_calculate_asleepacti_sleep_diaryacti_sleep_ensembleacti_sleep_fuse_labelsacti_sleep_guideracti_sleep_guider_requirementsacti_sleep_hdczaacti_sleep_hlrbacti_sleep_horangleacti_sleep_l5acti_sleep_labelacti_sleep_labelsacti_sleep_notwornacti_sleep_setwindowacti_sleep_sibacti_sleep_tudor_lockeacti_sleep_tudor_locke_diaryacti_sleeperpy_acti_asleeppy_acti_sleeper

Dependencies:actibaseactigraph.sleepractireadasleepassertthatbitbit64bitopsblobcachemcellrangerclicliprcpp11crayoncurldata.tableDBIdigestdplyrfarverfastmapgenericsGGIRreadggplot2gluegtableherehmsisobandjanitorjsonlitelabelinglatticelifecyclelubridatemagrittrmatlabMatrixmemoisepillarpkgconfigpngprettyunitsprogresspurrrR.methodsS3R.ooR.utilsR6rappdirsRColorBrewerRcppRcppRollRcppTOMLread.gt3xreadrreadxlrematchreticulaterlangrprojrootRSQLiteS7scalessleepersnakecasestringistringrtibbletidyrtidyselecttimechangetzdbutf8vctrsviridisLitevroomwithrzoo