Package: YPPE 1.0.1
Fabio Demarqui
YPPE: Yang and Prentice Model with Piecewise Exponential Baseline Distribution
Semiparametric modeling of lifetime data with crossing survival curves via Yang and Prentice model with piecewise exponential baseline distribution. Details about the model can be found in Demarqui and Mayrink (2019) <arxiv:1910.02406>. Model fitting carried out via likelihood-based and Bayesian approaches. The package also provides point and interval estimation for the crossing survival times.
Authors:
YPPE_1.0.1.tar.gz
YPPE_1.0.1.zip(r-4.7-x86_64)YPPE_1.0.1.zip(r-4.7-arm64)YPPE_1.0.1.zip(r-4.6-x86_64)YPPE_1.0.1.zip(r-4.6-arm64)
YPPE_1.0.1.tar.gz(r-4.7-arm64)YPPE_1.0.1.tar.gz(r-4.7-x86_64)YPPE_1.0.1.tar.gz(r-4.6-arm64)YPPE_1.0.1.tar.gz(r-4.6-x86_64)
YPPE_1.0.1.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
YPPE/json (API)
| # Install 'YPPE' in R: |
| install.packages('YPPE', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/fndemarqui/yppe/issues
Last updated from:163866d68e. Checks:8 NOTE, 2 OK. Indexed: no.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-arm64 | NOTE | 270 | ||
| linux-devel-x86_64 | NOTE | 247 | ||
| source / vignettes | OK | 314 | ||
| linux-release-arm64 | NOTE | 274 | ||
| linux-release-x86_64 | NOTE | 312 | ||
| windows-devel-arm64 | NOTE | 390 | ||
| windows-devel-x86_64 | NOTE | 291 | ||
| windows-release-arm64 | NOTE | 377 | ||
| windows-release-x86_64 | NOTE | 330 | ||
| wasm-release | OK | 156 |
Exports:coefconfintcrossTimesurvfittimeGridvcovyppe
Dependencies:abindbackportsBHcallrcheckmateclicpp11descdistributionalfarverFormulagenericsggplot2gluegridExtragtableinlineisobandlabelinglatticelifecycleloomagrittrMASSMatrixmatrixStatsnumDerivotelpillarpkgbuildpkgconfigposteriorprocessxpsQuickJSRR6RColorBrewerRcppRcppEigenRcppParallelrlangrstanrstantoolsS7scalesStanHeaderssurvivaltensorAtibbleutf8vctrsviridisLitewithr
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| The 'YPPE' package. | YPPE-package YPPE |
| Generic S3 method coef | coef |
| Estimated regression coefficients | coef.yppe |
| Generic S3 method confint | confint |
| Confidence intervals for the regression coefficients | confint.yppe |
| Generic S3 method crossTime | crossTime |
| Computes the crossing survival times | crossTime.yppe |
| Gastric cancer data set | gastric |
| IRESSA Pan-Asia Study (IPASS) data set | ipass |
| Print the summary.yppe output | print.summary.yppe |
| Summary for the yppe model | summary.yppe |
| Generic S3 method survfit | survfit |
| Survival function for the YPPE model | survfit.yppe |
| Time grid | timeGrid |
| Generic S3 method vcov | vcov |
| Covariance of the regression coefficients | vcov.yppe |
| Fits the Yang and Prentice model with baseline distribution modelled by the piecewise exponential distribution. | yppe {yppe} |