Package: TwoCutoff 0.1.0

Bhrigu Kumar Rajbongshi

TwoCutoff: Deriving Clinically Interpretable Cutoffs for Disease Biomarkers

Provides a reproducible pipeline for deriving two clinically meaningful cutoffs for disease biomarkers using a unified two-stage framework. The package integrates finite mixture modeling with risk prediction using biomarker plus clinical features, followed by decision curve analysis to evaluate clinical utility. Outputs include biomarker density plots, risk calibration curves, decision curves, and summary tables of diagnostic performance. Designed for researchers in bio-statistics, neurology, and data science, this package emphasizes reproducibility, transparency, and clear clinical relevance.

Authors:Bhrigu Kumar Rajbongshi [aut, cre, ctb], Seyed Ehsan Saffari [aut, ctb], Nastaran Marzban [aut, ctb]

TwoCutoff_0.1.0.tar.gz
TwoCutoff_0.1.0.tar.gz(r-4.7-any)TwoCutoff_0.1.0.tar.gz(r-4.6-any)
TwoCutoff_0.1.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html
DESCRIPTION |NEWS
card.svg |card.png
TwoCutoff/json (API)

# Install 'TwoCutoff' in R:
install.packages('TwoCutoff', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org'))
Datasets:

On CRAN:

Conda:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

2.70 score 7 exports 111 dependencies

Last updated from:46a709ed0e. Checks:4 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64OK214
source / vignettesOK231
linux-release-x86_64OK208
wasm-releaseOK198

Exports:adjust_scorecompare_performancedca_analysisderive_cutoffs_percentilederive_cutoffs_sensspecevaluate_performanceplot_two_cutoff

Dependencies:askpassbase64encbslibcachemcaretclasscliclockcodetoolscpp11crosstalkcurldata.tablediagramdigestdplyre1071evaluatefarverfastmapfontawesomeforeachfsfuturefuture.applygenericsggplot2globalsgluegowergridExtragtablehardhathighrhtmltoolshtmlwidgetshttripredisobanditeratorsjquerylibjsonlitekernlabKernSmoothknitrlabelinglaterlatticelavalazyevallifecyclelistenvlubridatemagrittrMASSMatrixmemoisemimemixtoolsModelMetricsnlmennetnumDerivopensslotelparallellypatchworkpillarpkgconfigplotlyplyrpROCprodlimprogressrpromisesproxypurrrR6rappdirsRColorBrewerRcpprecipesreshape2rlangrmarkdownrpartS7sassscalessegmentedshapesparsevctrsSQUAREMstringistringrsurvivalsystibbletidyrtidyselecttimechangetimeDatetinytextzdbutf8vctrsviridisLitewithrxfunxgboostyaml

Introduction to TwoCutoff

Rendered fromIntroduction_to_TwoCutoff.Rmdusingknitr::rmarkdownon Jun 24 2026.

Last update: 2026-06-24
Started: 2026-06-24