Package: SpadeR 0.1.1
Anne Chao
SpadeR: Species-Richness Prediction and Diversity Estimation with R
Estimation of various biodiversity indices and related (dis)similarity measures based on individual-based (abundance) data or sampling-unit-based (incidence) data taken from one or multiple communities/assemblages.
Authors:
SpadeR_0.1.1.tar.gz
SpadeR_0.1.1.tar.gz(r-4.5-noble)SpadeR_0.1.1.tar.gz(r-4.4-noble)
SpadeR_0.1.1.tgz(r-4.4-emscripten)SpadeR_0.1.1.tgz(r-4.3-emscripten)
SpadeR.pdf |SpadeR.html✨
SpadeR/json (API)
| # Install 'SpadeR' in R: |
| install.packages('SpadeR', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org')) |
Datasets:
- ChaoSharedData - Data for Function ChaoShared
- ChaoSpeciesData - Data for Function ChaoSpecies
- DiversityData - Data for Function Diversity
- GeneticsDataAbu - Human allele frequency data for Function Genetics
- SimilarityMultData - Data for Function SimilarityMult
- SimilarityPairData - Data for Function SimilarityPair
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated 8 years agofrom:d627774015. Checks:OK: 2. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Oct 31 2024 |
| R-4.5-linux | OK | Oct 31 2024 |
Exports:ChaoSharedChaoSpeciesDiversityGeneticsSimilarityMultSimilarityPair
Dependencies:
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Species-richness prediction and diversity estimation with R | SpadeR-package SpadeR |
| Estimation of the number of shared species between two communities/assemblages | ChaoShared |
| Data for Function ChaoShared | ChaoSharedData |
| Estimation of species richness in a community | ChaoSpecies |
| Data for Function ChaoSpecies | ChaoSpeciesData |
| Estimation of species diversity (Hill numbers) | Diversity |
| Data for Function Diversity | DiversityData |
| Estimation of genetic differentiation measures | Genetics |
| Human allele frequency data for Function Genetics | GeneticsDataAbu |
| Estimation of multiple-community similarity measures | SimilarityMult |
| Data for Function SimilarityMult | SimilarityMultData |
| Estimation of two-assemblage similarity measures | SimilarityPair |
| Data for Function SimilarityPair | SimilarityPairData |