Package: SoundShape 1.3.2

Pedro Rocha

SoundShape: Sound Waves Onto Morphometric Data

Implement a promising, and yet little explored protocol for bioacoustical analysis, the eigensound method by MacLeod, Krieger and Jones (2013) <doi:10.4404/hystrix-24.1-6299>. Eigensound is a multidisciplinary method focused on the direct comparison between stereotyped sounds from different species. 'SoundShape', in turn, provide the tools required for anyone to go from sound waves to Principal Components Analysis, using tools extracted from traditional bioacoustics (i.e. 'tuneR' and 'seewave' packages), geometric morphometrics (i.e. 'geomorph' package) and multivariate analysis (e.g. 'stats' package). For more information, please see Rocha and Romano (2021) and check 'SoundShape' repository on GitHub for news and updates <https://github.com/p-rocha/SoundShape>.

Authors:Pedro Rocha [aut, cre]

SoundShape_1.3.2.tar.gz
SoundShape_1.3.2.tar.gz(r-4.5-noble)SoundShape_1.3.2.tar.gz(r-4.4-noble)
SoundShape_1.3.2.tgz(r-4.4-emscripten)
SoundShape.pdf |SoundShape.html✨
SoundShape/json (API)

# Install 'SoundShape' in R:
install.packages('SoundShape', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/p-rocha/soundshape/issues

Datasets:
  • centralis - Vocalization of the frog _Physalaemus centralis_
  • cuvieri - Vocalization of the frog _Physalaemus cuvieri_
  • eig.sample - Sample of 3D point coordinates (semilandmarks) acquired with 'eigensound' function
  • kroyeri - Vocalization of the frog _Physalaemus kroyeri_
  • raven.list - Sample of tables containing selection boxes from Raven Pro software

3.08 score 12 scripts 279 downloads 1 mentions 6 exports 66 dependencies

Last updated 5 days agofrom:aa64cb52ec. Checks:OK: 2. Indexed: no.

TargetResultDate
Doc / VignettesOKNov 21 2024
R-4.5-linuxOKNov 21 2024

Exports:align.waveeigensoundhypo.surfpca.plotraven.to.wavethreeDspectro

Dependencies:abindapebase64encbslibcachemclicolorspacedigestevaluatefansifarverfastmapfontawesomefsgeomorphggplot2gluegtablehighrhtmltoolshtmlwidgetsisobandjpegjquerylibjsonliteknitrlabelinglatticelifecyclemagrittrMASSMatrixmemoisemgcvmimemisc3dmunsellnlmepillarpkgconfigplot3DplyrR6rappdirsRColorBrewerRcppreshape2rglrlangrmarkdownRRPPsassscalesseewavesignalstringistringrtibbletinytextuneRutf8vctrsviridisLitewithrxfunyaml

Getting started with SoundShape package

Pedro Rocha

Rendered fromGetting-started.Rmdusingknitr::rmarkdownon Nov 21 2024.

Last update: 2024-10-02
Started: 2020-10-29