Package: Sequential 4.6.0

Ivair Ramos Silva

Sequential: Exact Sequential Analysis for Poisson and Binomial Data

Functions to calculate exact critical values, statistical power, expected time to signal, and required sample sizes for performing exact sequential analysis. All these calculations can be done for either Poisson or binomial data, for continuous or group sequential analyses, and for different types of rejection boundaries. In case of group sequential analyses, the group sizes do not have to be specified in advance and the alpha spending can be arbitrarily settled. For regression versions of the methods, Monte Carlo and asymptotic methods are used.

Authors:Ivair Ramos Silva [aut, cre], Martin Kulldorff [aut]

Sequential_4.6.0.tar.gz
Sequential_4.6.0.tar.gz(r-4.7-any)Sequential_4.6.0.tar.gz(r-4.6-any)
Sequential_4.6.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
Sequential/json (API)

# Install 'Sequential' in R:
install.packages('Sequential', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org'))

On CRAN:

Conda:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

3.55 score 2 stars 1 packages 39 scripts 704 downloads 3 mentions 33 exports 10 dependencies

Last updated from:e0eb52f4b7. Checks:4 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64OK149
source / vignettesOK175
linux-release-x86_64OK153
wasm-releaseOK116

Exports:Analyze.BinomialAnalyze.CondPoissonAnalyze.MultinomialAnalyze.PoissonAnalyze.wBinomialAnalyzeRegression.BinomialAnalyzeRegression.CondPoissonAnalyzeRegression.PoissonAnalyzeSetUp.BinomialAnalyzeSetUp.CondPoissonAnalyzeSetUp.MultinomialAnalyzeSetUp.PoissonAnalyzeSetUp.wBinomialAnalyzeSetUpRegression.BinomialAnalyzeSetUpRegression.CondPoissonAnalyzeSetUpRegression.PoissonConfidenceInterval.BinomialCV.BinomialCV.CondPoissonCV.PoissonOptimal.BinomialPerformance.AlphaSpend.BinomialPerformance.AlphaSpend.CondPoissonPerformance.AlphaSpend.PoissonPerformance.BinomialPerformance.CondPoissonPerformance.PoissonPerformance.Threshold.BinomialPerformance.Threshold.CondPoissonPerformance.Threshold.PoissonSampleSize.BinomialSampleSize.CondPoissonSampleSize.Poisson

Dependencies:bootdigestfftwgenericslatticemaxLikmiscToolspmultinomsandwichzoo

Readme and manuals

Help Manual

Help pageTopics
Analysis Support, Critical Values, Power, Time to Signal and Sample Size for Sequential Analysis with Poisson and Binomial Data.Sequential-package Sequential
Function for group sequential analyses for binomial data, without the need to know group sizes a priori.Analyze.Binomial
Function to conduct group sequential analyses for conditional Poisson data without the need to know group sizes a priori.Analyze.CondPoisson
Function for group sequential analyses for multinomial data, without the need to know group sizes a priori.Analyze.Multinomial
Function to conduct group sequential analyses for Poisson data without the need to know group sizes a priori.Analyze.Poisson
Function for group sequential analyses of multiple weighted binomial endpoints, without the need to know group sizes a priori.Analyze.wBinomial
Function for MaxSPRT regression analyses with binary/binomial data, without the need to know group sizes a priori.AnalyzeRegression.Binomial
Function for MaxSPRT regression analyses with conditional Poisson data, without the need to know group sizes a priori.AnalyzeRegression.CondPoisson
Function for MaxSPRT regression analyses with Poisson data, without the need to know group sizes a priori.AnalyzeRegression.Poisson
Function to set up input parameters before using the 'Analyze.Binomial' function for the first time.AnalyzeSetUp.Binomial
Function to set up input parameters before using the 'Analyze.CondPoisson' function for the first time.AnalyzeSetUp.CondPoisson
Function to set up input parameters before using the 'Analyze.Multinomial' function for the first time.AnalyzeSetUp.Multinomial
Function to set up input parameters before using the 'Analyze.Poisson' function for the first time.AnalyzeSetUp.Poisson
Function to set up input parameters before using the 'Analyze.wBinomial' function for the first time.AnalyzeSetUp.wBinomial
Function to set up input parameters before using the 'AnalyzeRegression.Binomial' function for the first time.AnalyzeSetUpRegression.Binomial
Function to set up input parameters before using the 'AnalyzeRegression.CondPoisson' function for the first time.AnalyzeSetUpRegression.CondPoisson
Function to set up input parameters before using the 'AnalyzeRegression.Poisson' function for the first time.AnalyzeSetUpRegression.Poisson
Confidence Interval for the Relative Risk Following a Sequential Test with Binary Data.ConfidenceInterval.Binomial
Calculates exact critical values for group and continuous sequential analysis with binomial data.CV.Binomial
Critical values for continuous sequential CMaxSPRT for Poisson data with limited information from historical cohort.CV.CondPoisson
Critical values for group and continuous sequential analysis with Poisson data.CV.Poisson
Optimal alpha spending for minimizing expected time to signal for continuous and group sequential analysis with binomial data.Optimal.Binomial
Calculates performance and signaling threshold for user-defined alpha spending for sequential analysis with binomial data.Performance.AlphaSpend.Binomial
Calculates performance and signaling thresholds for user-defined alpha spending for sequential analysis with conditional Poisson data.Performance.AlphaSpend.CondPoisson
Calculates performance and signaling thresholds for user-defined alpha spending for sequential analysis with Poisson data.Performance.AlphaSpend.Poisson
Statistical power, expected time to signal and expected sample size for group and continuous sequential analysis with binomial data.Performance.Binomial
Statistical power, expected time to signal and expected sample size for the continuous sequential CMaxSPRT for Poisson data with limited information from historical cohort.Performance.CondPoisson
Calculates statistical power, expected time to signal and expected sample size for group and continuous sequential analysis with Poisson data.Performance.Poisson
Statistical Performance and Alpha Spending For User-defined Signaling Threshold With Binomial Data.Performance.Threshold.Binomial
Performance and alpha spending for user-defined signaling threshold for sequential analysis with conditional Poisson data.Performance.Threshold.CondPoisson
Performance and alpha spending for user-defined signaling threshold for sequential analysis with Poisson data.Performance.Threshold.Poisson
Sample size calculation for continuous sequential analysis with binomial data.SampleSize.Binomial
Sample size calculation for the continuous sequential CMaxSPRT for Poisson data with limited information from historical cohort.SampleSize.CondPoisson
Sample size calculation for continuous sequential analysis with Poisson data.SampleSize.Poisson