Package: SUMO 0.1.0

Bernard Isekah Osangir

SUMO: Generating Multi-Omics Datasets

Designed to generate multi-omics datasets that closely reflect biological complexity, the package allows for testing, validation, and benchmarking of multi-omics integrative methods. The simulated data includes one or multiple predefined signals (latent/unobserved factors), giving users complete control over the data-generated characteristics. Tini, Giulia, et al (2019) <doi:10.1093/bib/bbx167>.

Authors:Bernard Isekah Osang'ir [aut, cre], Bernard Isekah Osang'ir [aut]

SUMO_0.1.0.tar.gz
SUMO_0.1.0.tar.gz(r-4.5-noble)SUMO_0.1.0.tar.gz(r-4.4-noble)
SUMO_0.1.0.tgz(r-4.4-emscripten)SUMO_0.1.0.tgz(r-4.3-emscripten)
SUMO.pdf |SUMO.html✨
SUMO/json (API)

# Install 'SUMO' in R:
install.packages('SUMO', repos = 'https://cloud.r-project.org')

On CRAN:

Conda:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

1.00 score 429 downloads 10 exports 29 dependencies

Last updated 5 months agofrom:ce71382078. Checks:3 OK. Indexed: yes.

TargetResultLatest binary
Doc / VignettesOKMar 22 2025
R-4.5-linuxOKMar 22 2025
R-4.4-linuxOKMar 22 2025

Exports:divide_features_onedivide_features_twodivide_samplesdivide_vectorfeature_selection_onefeature_selection_twoOmixCraftHDplot_factorplot_simDataplot_weights

Dependencies:clicolorspacefansifarverggplot2gluegridExtragtableisobandlabelinglatticelifecyclemagrittrMASSMatrixmgcvmunsellnlmepillarpkgconfigR6RColorBrewerrlangscalestibbleutf8vctrsviridisLitewithr

Citation

To cite package ‘SUMO’ in publications use:

Isekah Osang'ir B, Isekah Osang'ir B (2024). SUMO: Generating Multi-Omics Datasets. R package version 0.1.0, https://CRAN.R-project.org/package=SUMO.

Corresponding BibTeX entry: 

  @Manual{,
    title = {SUMO: Generating Multi-Omics Datasets},
    author = {Bernard {Isekah Osang'ir} and Bernard {Isekah Osang'ir}},
    year = {2024},
    note = {R package version 0.1.0},
    url = {https://CRAN.R-project.org/package=SUMO},
  }