Package: SOHPIE 1.0.6

Seungjun Ahn

SOHPIE: Statistical Approach via Pseudo-Value Information and Estimation

'SOHPIE' (pronounced as SOFIE) is a novel pseudo-value regression approach for differential co-abundance network analysis of microbiome data, which can include additional clinical covariate in the model. The full methodological details can be found in Ahn S and Datta S (2023) <arxiv:2303.13702v1>.

Authors:Seungjun Ahn [cre, aut, trl], Somnath Datta [ctb, ths]

SOHPIE_1.0.6.tar.gz
SOHPIE_1.0.6.tar.gz(r-4.5-noble)SOHPIE_1.0.6.tar.gz(r-4.4-noble)
SOHPIE_1.0.6.tgz(r-4.4-emscripten)SOHPIE_1.0.6.tgz(r-4.3-emscripten)
SOHPIE.pdf |SOHPIE.html✨
SOHPIE/json (API)

Peer review:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

15 exports 0.00 score 20 dependencies 3 scripts 829 downloads

Last updated 11 months agofrom:25799e5401. Checks:OK: 2. Indexed: yes.

Exports:asso_matcoeffcoeff_specific_varDCtaxa_tabpseudoregpseudoreg.summarypvalpval_specific_varqvalqval_specific_varSOHPIE_DNAstderrsstderrs_specific_varthetahatsthetatildefun

Dependencies:cliDEoptimRdplyrfansifdrtoolgenericsgluegtoolslifecyclemagrittrpillarpkgconfigR6rlangrobustbasetibbletidyselectutf8vctrswithr