Package: SOFIA 1.0

Luis Diaz-Garcia

SOFIA: Making Sophisticated and Aesthetical Figures in R

Software that leverages the capabilities of Circos by manipulating data, preparing configuration files, and running the Perl-native Circos directly from the R environment with minimal user intervention. Circos is a novel software that addresses the challenges in visualizing genetic data by creating circular ideograms composed of tracks of heatmaps, scatter plots, line plots, histograms, links between common markers, glyphs, text, and etc. Please see <http://www.circos.ca>.

Authors:Luis Diaz-Garcia

SOFIA_1.0.tar.gz
SOFIA_1.0.tar.gz(r-4.5-noble)SOFIA_1.0.tar.gz(r-4.4-noble)
SOFIA_1.0.tgz(r-4.4-emscripten)SOFIA_1.0.tgz(r-4.3-emscripten)
SOFIA.pdf |SOFIA.html
SOFIA/json (API)

# Install 'SOFIA' in R:
install.packages('SOFIA', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Datasets:
  • mark0 - Genetic maps to be used as examples for generating Circos figures

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

1 exports 3.38 score 1 dependencies 23 mentions 23 scripts 121 downloads

Last updated 8 years agofrom:1e337a5108. Checks:OK: 2. Indexed: yes.

TargetResultDate
Doc / VignettesOKSep 13 2024
R-4.5-linuxOKSep 13 2024

Exports:SOFIA

Dependencies:png