Package: RNentropy 1.3.3

Federico Zambelli

RNentropy: Entropy Based Method for the Detection of Significant Variation in Gene Expression Data

An implementation of a method based on information theory devised for the identification of genes showing a significant variation of expression across multiple conditions. Given expression estimates from any number of RNA-Seq samples and conditions it identifies genes or transcripts with a significant variation of expression across all the conditions studied, together with the samples in which they are over- or under-expressed. It also detects genes whose relative isoform usage changes across samples (isoform switching). Zambelli et al. (2018) <doi:10.1093/nar/gky055>.

Authors:Federico Zambelli [aut, cre], Giulio Pavesi [aut]

RNentropy_1.3.3.tar.gz
RNentropy_1.3.3.zip(r-4.7-any)RNentropy_1.3.3.zip(r-4.6-any)
RNentropy_1.3.3.tar.gz(r-4.7-any)RNentropy_1.3.3.tar.gz(r-4.6-any)
RNentropy_1.3.3.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
RNentropy/json (API)

# Install 'RNentropy' in R:
install.packages('RNentropy', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org'))
Datasets:

On CRAN:

Conda:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

2.08 score 12 scripts 289 downloads 2 mentions 9 exports 0 dependencies

Last updated from:6c8f91d5d4. Checks:6 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-develOK135
source / vignettesOK216
linux-releaseOK120
windows-develOK71
windows-releaseOK82
wasm-releaseOK88

Exports:RN_calcRN_calc_GPVRN_calc_LPVRN_iso_calcRN_iso_selectRN_pmiRN_selectRNentropyRNentropy_iso_switch

Dependencies: