Rendered from
Intro.Rmdusingknitr::rmarkdownPackage: PHclust 0.1.0
Zhili Qiao
PHclust: Poisson Hurdle Clustering for Sparse Microbiome Data
Clustering analysis for sparse microbiome data, based on a Poisson hurdle model.
Authors:
PHclust_0.1.0.tar.gz
PHclust_0.1.0.tar.gz(r-4.7-any)PHclust_0.1.0.tar.gz(r-4.6-any)
PHclust_0.1.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
PHclust/json (API)
| # Install 'PHclust' in R: |
| install.packages('PHclust', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org')) |
Datasets:
- sample_data - Sample of sparse microbiome count data
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated from:3214d29664. Checks:4 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-x86_64 | OK | 119 | ||
| source / vignettes | OK | 189 | ||
| linux-release-x86_64 | OK | 123 | ||
| wasm-release | OK | 97 |
Exports:HybridPHclusterplot_abundance
Dependencies:
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Calculate optimal number of clusters. | Hybrid |
| Poisson hurdle clustering | PHcluster |
| Plot of feature abundance level | plot_abundance |
| Sample of sparse microbiome count data | sample_data |