Package: PHENIX 1.3.2

A. J. Muñoz-Pajares

PHENIX: Phenotypic Integration Index

Provides functions to estimate the size-controlled phenotypic integration index, a novel method by Torices & Méndez (2014) <doi:10.1086/676622> to solve problems due to individual size when estimating integration (namely, larger individuals have larger components, which will drive a correlation between components only due to resource availability that might obscure the observed measures of integration). In addition, the package also provides the classical estimation by Wagner (1984) <doi:10.1007/BF00275224>, bootstrapping and jackknife methods to calculate confidence intervals and a significance test for both integration indices. Further details can be found in Torices & Muñoz-Pajares <doi:10.3732/apps.1400104>.

Authors:R. Torices [aut], A. J. Muñoz-Pajares [aut, cre]

PHENIX_1.3.2.tar.gz
PHENIX_1.3.2.tar.gz(r-4.7-any)PHENIX_1.3.2.tar.gz(r-4.6-any)
PHENIX_1.3.2.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
PHENIX/json (API)

# Install 'PHENIX' in R:
install.packages('PHENIX', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org'))
Datasets:
  • paeonia - Phenotypic integration example dataset #1
  • tussilago - Phenotypic integration example dataset #2

On CRAN:

Conda:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

2.52 score 33 scripts 242 downloads 2.3k mentions 9 exports 3 dependencies

Last updated from:8d0cd70ec2. Checks:4 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64OK100
source / vignettesOK130
linux-release-x86_64OK109
wasm-releaseOK97

Exports:cor.parpintpint.bootpint.jackpint.ppintscpintsc.bootpintsc.jackpintsc.p

Dependencies:MASSppcorSuppDists