Package: PGEE 1.5

Gul Inan

PGEE: Penalized Generalized Estimating Equations in High-Dimension

Fits penalized generalized estimating equations to longitudinal data with high-dimensional covariates.

Authors:Gul Inan, Jianhui Zhou and Lan Wang

PGEE_1.5.tar.gz
PGEE_1.5.tar.gz(r-4.5-noble)PGEE_1.5.tar.gz(r-4.4-noble)
PGEE_1.5.tgz(r-4.4-emscripten)PGEE_1.5.tgz(r-4.3-emscripten)
PGEE.pdf |PGEE.html✨
PGEE/json (API)

# Install 'PGEE' in R:
install.packages('PGEE', repos = 'https://cloud.r-project.org')
Datasets:
  • yeastG1 - Yeast cell-cycle gene expression data

On CRAN:

Conda:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

1.95 score 1 packages 278 downloads 3 mentions 23 exports 2 dependencies

Last updated 8 years agofrom:9d3e3ef020. Checks:3 OK. Indexed: yes.

TargetResultLatest binary
Doc / VignettesOKMar 13 2025
R-4.5-linuxOKMar 13 2025
R-4.4-linuxOKMar 13 2025

Exports:CVfitMGeeMGEEmycor_gee1mycor_gee2PGeePGEEprint.CVfitprint.MGeeprint.MGEEprint.PGeeprint.PGEEprint.summary.MGeeprint.summary.MGEEprint.summary.PGeeprint.summary.PGEEq_scadS_H_E_MS_H_Msummary.MGeesummary.MGEEsummary.PGeesummary.PGEE

Dependencies:MASSmvtnorm

Citation

To cite package ‘PGEE’ in publications use:

Inan G, Zhou J, Wang L (2017). PGEE: Penalized Generalized Estimating Equations in High-Dimension. R package version 1.5, https://CRAN.R-project.org/package=PGEE.

ATTENTION: This citation information has been auto-generated from the package DESCRIPTION file and may need manual editing, see ‘help("citation")’.

Corresponding BibTeX entry: 

  @Manual{,
    title = {PGEE: Penalized Generalized Estimating Equations in
      High-Dimension},
    author = {Gul Inan and Jianhui Zhou and Lan Wang},
    year = {2017},
    note = {R package version 1.5},
    url = {https://CRAN.R-project.org/package=PGEE},
  }

Readme and manuals

Help Manual

Help pageTopics
Penalized Generalized Estimating EquationsPGEE-package
Function to compute cross-validated tuning parameter valueCVfit print.CVfit
Function to fit generalized estimating equationsMGEE MGee mycor_gee1 print.MGEE print.MGee print.summary.MGEE print.summary.MGee summary.MGEE summary.MGee S_H_M
Function to fit penalized generalized estimating equationsmycor_gee2 PGEE PGee print.PGEE print.PGee print.summary.PGEE print.summary.PGee q_scad summary.PGEE summary.PGee S_H_E_M
Yeast cell-cycle gene expression datayeastG1