Package: Oncofilterfast 1.0.0

Pheonix Chen

Oncofilterfast: Aids in the Analysis of Genes Influencing Cancer Survival

Aids in the analysis of genes influencing cancer survival by including a principal function, calculator(), which calculates the P-value for each provided gene under the optimal cutoff in cancer survival studies. Grounded in methodologies from significant works, this package references Therneau's 'survival' package (Therneau, 2024; <https://CRAN.R-project.org/package=survival>) and the survival analysis extensions by Therneau and Grambsch (2000, ISBN 0-387-98784-3). It also integrates the 'survminer' package by Kassambara et al. (2021; <https://CRAN.R-project.org/package=survminer>), enhancing survival curve visualizations with 'ggplot2'.

Authors:Pheonix Chen [aut, cre]

Oncofilterfast_1.0.0.tar.gz
Oncofilterfast_1.0.0.tar.gz(r-4.5-noble)Oncofilterfast_1.0.0.tar.gz(r-4.4-noble)
Oncofilterfast_1.0.0.tgz(r-4.4-emscripten)Oncofilterfast_1.0.0.tgz(r-4.3-emscripten)
Oncofilterfast.pdf |Oncofilterfast.html✨
Oncofilterfast/json (API)

# Install 'Oncofilterfast' in R:
install.packages('Oncofilterfast', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

1.30 score 2 stars 1 scripts 111 downloads 1 exports 91 dependencies

Last updated 9 months agofrom:69ca0eb85b. Checks:OK: 2. Indexed: yes.

TargetResultDate
Doc / VignettesOKDec 23 2024
R-4.5-linuxOKDec 23 2024

Exports:calculator

Dependencies:abindbackportsbootbroomcarcarDataclicolorspacecommonmarkcorrplotcowplotcpp11curldata.tableDerivdoBydplyrevaluateexactRankTestsfansifarverFormulagenericsggplot2ggpubrggrepelggsciggsignifggtextgluegridExtragridtextgtablehighrisobandjpegkm.ciKMsurvknitrlabelinglatticelifecyclelme4magrittrmarkdownMASSMatrixMatrixModelsmaxstatmgcvmicrobenchmarkminqamodelrmunsellmvtnormnlmenloptrnnetnumDerivpbkrtestpillarpkgconfigpngpolynompurrrquantregR6RColorBrewerRcppRcppEigenrlangrstatixscalesSparseMstringistringrsurvivalsurvminersurvMisctibbletidyrtidyselectutf8vctrsviridisLitewithrxfunxml2xtableyamlzoo