Introduction | Getting Started | Aligning Two Character Strings | Cell Line Names | Conclusions
Package: NameNeedle 1.2.10
Kevin R. Coombes
NameNeedle: Using Needleman-Wunsch to Match Sample Names
The Needleman-Wunsch global alignment algorithm can be used to find approximate matches between sample names in different data sets. See Wang et al. (2010) <doi:10.4137/CIN.S5613>.
Authors:
NameNeedle_1.2.10.tar.gz
NameNeedle_1.2.10.tar.gz(r-4.7-any)NameNeedle_1.2.10.tar.gz(r-4.6-any)
NameNeedle_1.2.10.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
NameNeedle/json (API)
| # Install 'NameNeedle' in R: |
| install.packages('NameNeedle', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://r-forge.r-project.org/projects/oompa
Datasets:
Last updated from:0c39cc9fb1. Checks:4 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-x86_64 | OK | 101 | ||
| source / vignettes | OK | 168 | ||
| linux-release-x86_64 | OK | 105 | ||
| wasm-release | OK | 108 |
Exports:defaultNeedleParamsneedlesneedleScores
Dependencies:
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Cell Line Names | cellLineNames cellLineNames-data illuNames illuType rppaNames sf2Names |
| Needleman-Wunsch simple global alignment algorithm | defaultNeedleParams needles needleScores |