Package: MicrobiomeStat 1.2
Jun Chen
MicrobiomeStat: Statistical Methods for Microbiome Compositional Data
A suite of methods for powerful and robust microbiome data analysis addressing zero-inflation, phylogenetic structure and compositional effects (Zhou et al. (2022)<doi:10.1186/s13059-022-02655-5>). The methods can be applied to the analysis of other (high-dimensional) compositional data arising from sequencing experiments.
Authors:
MicrobiomeStat_1.2.tar.gz
MicrobiomeStat_1.2.tar.gz(r-4.5-noble)MicrobiomeStat_1.2.tar.gz(r-4.4-noble)
MicrobiomeStat_1.2.tgz(r-4.4-emscripten)MicrobiomeStat_1.2.tgz(r-4.3-emscripten)
MicrobiomeStat.pdf |MicrobiomeStat.html✨
MicrobiomeStat/json (API)
| # Install 'MicrobiomeStat' in R: |
| install.packages('MicrobiomeStat', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org')) |
- smokers - Microbiome data from the human upper respiratory tract
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated 8 months agofrom:df13760feb. Checks:OK: 2. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Oct 29 2024 |
| R-4.5-linux | OK | Oct 29 2024 |
Exports:lindalinda.plotlinda.wald.test
Dependencies:bootcliclueclustercodetoolscolorspacefansifarverfBasicsforeachggplot2ggrepelgluegssgtableisobanditeratorslabelinglatticelifecyclelme4lmerTestmagrittrMASSMatrixmatrixStatsmgcvminqamodeestmunsellnlmenloptrnumDerivpillarpkgconfigR6RColorBrewerRcppRcppEigenrlangrmutilrpartscalesspatialstablestablediststatipstatmodtibbletimeDatetimeSeriesutf8vctrsviridisLitewithr
