Package: MiDA 0.1.2
Elena Filatova
MiDA: Microarray Data Analysis
Set of functions designed to simplify transcriptome analysis and identification of marker molecules using microarrays data. The package includes a set of functions that allows performing full pipeline of analysis including data normalization, summarisation, binary classification, FDR (False Discovery Rate) multiple comparison and the definition of potential biological markers.
Authors:
MiDA_0.1.2.tar.gz
MiDA_0.1.2.tar.gz(r-4.5-noble)MiDA_0.1.2.tar.gz(r-4.4-noble)
MiDA_0.1.2.tgz(r-4.4-emscripten)MiDA_0.1.2.tgz(r-4.3-emscripten)
MiDA.pdf |MiDA.html✨
MiDA/json (API)
# Install 'MiDA' in R: |
install.packages('MiDA', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org')) |
- IMexpression - Infectious mononucleosis transcriptome
- IMspecimen - Specimen features
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated 6 years agofrom:e0397db5e0. Checks:OK: 1 NOTE: 1. Indexed: yes.
Target | Result | Date |
---|---|---|
Doc / Vignettes | OK | Dec 19 2024 |
R-4.5-linux | NOTE | Dec 19 2024 |
Exports:MiBiClassGBODTMiDataSampleMiFracDataMiInflCountMiIntDepthAjustMiNormMiNTreesAjustMiSelectSignifMiShrinkAjustMiSpecimenSampleMiStatCountMiSummarize
Dependencies:annotateAnnotationDbiaskpassBiobaseBiocGenericsBiostringsbitbit64blobcachemcaretclasscliclockcodetoolscolorspacecpp11crayoncurldata.tableDBIdiagramdigestdplyre1071fansifarverfastmapforeachfuturefuture.applygbmgenefiltergenericsGenomeInfoDbGenomeInfoDbDataggplot2globalsgluegowergtablehardhathttripredIRangesisobanditeratorsjsonliteKEGGRESTKernSmoothlabelinglatticelavalifecyclelimmalistenvlubridatemagrittrMASSMatrixMatrixGenericsmatrixStatsmclustmemoisemgcvmimeModelMetricsmunsellnlmennetnor1mixnumDerivopensslparallellypillarpkgconfigplogrplyrpngpreprocessCorepROCprodlimprogressrproxypurrrR6RColorBrewerRcpprecipesreshape2rlangrpartRSQLiteS4VectorsscalesshapeSQNSQUAREMstatmodstringistringrsurvivalsystibbletidyrtidyselecttimechangetimeDatetzdbUCSC.utilsutf8vctrsviridisLitewithrXMLxtableXVectorzlibbioc