Package: MethodOpt 1.0.0
Stephanie Gamble
MethodOpt: Advanced Method Optimization for Spectra-Generating Sampling and Analysis Instrumentation
A graphical user interface to apply an advanced method optimization algorithm to various sampling and analysis instruments. This includes generating experimental designs, uploading and viewing data, and performing various analyses to determine the optimal method. Details of the techniques used in this package are published in Gamble, Granger, & Mannion (2024) <doi:10.1021/acs.analchem.3c05763>.
Authors:
MethodOpt_1.0.0.tar.gz
MethodOpt_1.0.0.tar.gz(r-4.5-noble)MethodOpt_1.0.0.tar.gz(r-4.4-noble)
MethodOpt_1.0.0.tgz(r-4.4-emscripten)MethodOpt_1.0.0.tgz(r-4.3-emscripten)
MethodOpt.pdf |MethodOpt.html✨
MethodOpt/json (API)
| # Install 'MethodOpt' in R: |
| install.packages('MethodOpt', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org')) |
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated 3 months agofrom:5e839e5602. Checks:OK: 1 NOTE: 1. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Dec 19 2024 |
| R-4.5-linux | NOTE | Dec 19 2024 |
Dependencies:AlgDesignbase64encbslibcachemclicolorspacecombinatcommonmarkconf.designcpp11crayoncrosstalkDiceDesigndigestDoE.baseDoE.wrapperdplyrDTestimabilityevaluatefansifarverfastmapfontawesomeFrF2fsgenericsggplot2gluegmpgtablegtoolshighrhtmltoolshtmlwidgetshttpuvigraphisobandjquerylibjsonliteknitrlabelinglaterlatticelazyevallhslifecyclelmtestmagrittrMASSmathjaxrMatrixmemoisemgcvmimemunsellnlmenumberspartitionspillarpkgconfigpolynompromisespurrrR6rappdirsrbibutilsRColorBrewerRcppRdpackrlangrmarkdownrsmsassscalesscatterplot3dsetssfsmiscshinyshinyalertshinyBSshinyFeedbackshinyjssourcetoolstibbletidyselecttinytexutf8uuidvcdvctrsviridisLitewithrxfunxtableyamlzipzoo
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Computes ANOVA test | anovaben |
| Computes areas of peaks | area |
| Baseline correction | blc |
| Generate a Gaussian fit | gauss |
| Method optimization GUI | MethodOpt |
| Optimization algorithm | opt |
| Peak searching algorithm without retention times | peaks |
| peak calculations with retention times | peaks_rts |
| Calculate widths | widths |