Package: MatrixCorrelation 0.10.0

Kristian Hovde Liland

MatrixCorrelation: Matrix Correlation Coefficients

Computation and visualization of matrix correlation coefficients. The main method is the Similarity of Matrices Index, while various related measures like r1, r2, r3, r4, Yanai's GCD, RV, RV2, adjusted RV, Rozeboom's linear correlation and Coxhead's coefficient are included for comparison and flexibility.

Authors:Kristian Hovde Liland

MatrixCorrelation_0.10.0.tar.gz
MatrixCorrelation_0.10.0.tar.gz(r-4.5-noble)MatrixCorrelation_0.10.0.tar.gz(r-4.4-noble)
MatrixCorrelation_0.10.0.tgz(r-4.4-emscripten)MatrixCorrelation_0.10.0.tgz(r-4.3-emscripten)
MatrixCorrelation.pdf |MatrixCorrelation.html✨
MatrixCorrelation/json (API)
NEWS

# Install 'MatrixCorrelation' in R:
install.packages('MatrixCorrelation', repos = 'https://cloud.r-project.org')

Bug tracker:https://github.com/khliland/matrixcorrelation/issues0 issues

Uses libs:
  • openblas– Optimized BLAS
  • c++– GNU Standard C++ Library v3
Datasets:

On CRAN:

Conda:r-matrixcorrelation-0.10.0(2025-03-25)

openblascpp

2.78 score 2 packages 488 downloads 2 mentions 21 exports 19 dependencies

Last updated 3 years agofrom:cf8b6b352c. Checks:1 OK, 2 NOTE. Indexed: no.

TargetResultLatest binary
Doc / VignettesOKMar 06 2025
R-4.5-linux-x86_64NOTEMar 06 2025
R-4.4-linux-x86_64NOTEMar 06 2025

Exports:allCorrelationscor.test_eqCoxheadGCDis.signifPCAcvPCAimputePSIr1r2r3r4RozeboomRVRV2RVadjRVadjGhaziriRVadjMayesignificantSMIsqveccor

Dependencies:clicrayongluehmslatticelifecycleMatrixpkgconfigplotrixpracmaprettyunitsprogressR6RcppRcppArmadilloRcppEigenrlangRSpectravctrs

Citation

To cite the MatrixCorrelation package in publications use:

Ulf Geir Indahl, Tormod Næs and Kristian Hovde Liland (2018). A similarity index for comparing coupled matrices. Journal of Chemometrics, e3049.

Corresponding BibTeX entry: 

  @Article{,
    title = {A similarity index for comparing coupled matrices},
    author = {Ulf Geir Indahl and Tormod Næs and Kristian Hovde
      Liland},
    year = {2018},
    volume = {e3049},
    journal = {Journal of Chemometrics},
  }

Readme and manuals

Matrix Correlation Coefficients - MatrixCorrelation

Installation

# Install release version from CRAN  
install.packages("MatrixCorrelation")  
# Install development version from GitHub  
devtools::install_github("khliland/MatrixCorrelation")

Contents

  • Matrix correlation measures
    • Similarity of Matrices Index (SMI)
    • RV, RV2, RVadj
    • r1, r2, r3, r4
    • Procrustes Similarity Index (PSI)
    • Coxheard
    • Roseboom
  • Principal Component Analysis tools
    • Non-naive cross-validation
    • Imputation using component estimation
  • One dataset