Package: MRmediation 1.0.1
Qi Yan
MRmediation: A Causal Mediation Method with Methylated Region (MR) as the Mediator
A causal mediation approach under the counterfactual framework to test the significance of total, direct and indirect effects. In this approach, a group of methylated sites from a predefined region are utilized as the mediator, and the functional transformation is used to reduce the possible high dimension in the region-based methylated sites and account for their location information.
Authors:
MRmediation_1.0.1.tar.gz
MRmediation_1.0.1.tar.gz(r-4.5-noble)MRmediation_1.0.1.tar.gz(r-4.4-noble)
MRmediation_1.0.1.tgz(r-4.4-emscripten)MRmediation_1.0.1.tgz(r-4.3-emscripten)
MRmediation.pdf |MRmediation.html✨
MRmediation/json (API)
| # Install 'MRmediation' in R: |
| install.packages('MRmediation', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org')) |
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated 4 years agofrom:8f84ea02a2. Checks:OK: 2. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Aug 22 2024 |
| R-4.5-linux | OK | Aug 22 2024 |
Exports:mediationmediation_single
Dependencies:ashbitopscliclustercolorspacedeSolvefansifarverfdafdsFNNggplot2gluegtablehdrcdeisobandkernlabKernSmoothkslabelinglatticelifecyclelocfitmagrittrMASSMatrixmclustmgcvmulticoolmunsellmvtnormnlmepcaPPpillarpkgconfigpracmaR6rainbowRColorBrewerRcppRCurlrlangscalestibbleutf8vctrsviridisLitewithr
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| This is the data for examples | data example_data pos |
| A causal mediation method with methylated region as the mediator | mediation |
| A causal mediation method with a single CpG site as the mediator | mediation_single |