Package: MAGEE 1.4.2
MAGEE: Mixed Model Association Test for GEne-Environment Interaction
Use a 'glmmkin' class object (GMMAT package) from the null model to perform generalized linear mixed model-based single-variant and variant set main effect tests, gene-environment interaction tests, and joint tests for association, as proposed in Wang et al. (2020) <doi:10.1002/gepi.22351>.
Authors:
MAGEE_1.4.2.tar.gz
MAGEE_1.4.2.tar.gz(r-4.5-noble)MAGEE_1.4.2.tar.gz(r-4.4-noble)
MAGEE_1.4.2.tgz(r-4.4-emscripten)MAGEE_1.4.2.tgz(r-4.3-emscripten)
MAGEE.pdf |MAGEE.html✨
MAGEE/json (API)
# Install 'MAGEE' in R: |
install.packages('MAGEE', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org')) |
- example - Example dataset
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated 5 months agofrom:f354c4fa82. Checks:OK: 1 ERROR: 1. Indexed: no.
Target | Result | Date |
---|---|---|
Doc / Vignettes | OK | Nov 25 2024 |
R-4.5-linux-x86_64 | ERROR | Nov 25 2024 |
Exports:glmm.geiglmm.gei.metaMAGEEMAGEE.lowmemMAGEE.metaMAGEE.prep
Dependencies:codetoolsCompQuadFormdata.tableforeachGMMATiteratorslatticeMASSMatrixRcppRcppArmadillo
Readme and manuals
Help Manual
Help page | Topics |
---|---|
Mixed Model Association Test for GEne-Environment Interaction | MAGEE-package |
Example dataset | example |
GLMM based single variant tests for gene-environment interactions | glmm.gei |
GLMM based meta-analysis of single variant tests for gene-environment interactions | glmm.gei.meta |
Mixed model Association tests for GEne-Environment interactions | MAGEE MAGEE.lowmem MAGEE.prep |
Mixed model Association tests for GEne-Environment interactions meta-analysis | MAGEE.meta |