Package: HUM 2.0
Natalia Novoselova
HUM: Compute HUM Value and Visualize ROC Curves
Tools for computing HUM (Hypervolume Under the Manifold) value to estimate features ability to discriminate the class labels, visualizing the ROC curve for two or three class labels (Natalia Novoselova, Cristina Della Beffa, Junxi Wang, Jialiang Li, Frank Pessler, Frank Klawonn (2014) <doi:10.1093/bioinformatics/btu086>).
Authors:
HUM_2.0.tar.gz
HUM_2.0.tar.gz(r-4.5-noble)HUM_2.0.tar.gz(r-4.4-noble)
HUM_2.0.tgz(r-4.4-emscripten)HUM_2.0.tgz(r-4.3-emscripten)
HUM.pdf |HUM.html✨
HUM/json (API)
| # Install 'HUM' in R: |
| install.packages('HUM', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org')) |
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated 2 years agofrom:f2936cb15b. Checks:OK: 1 NOTE: 1. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Sep 15 2024 |
| R-4.5-linux-x86_64 | NOTE | Sep 15 2024 |
Exports:CalcGeneCalcROCCalculate3DCalculateHUM_ExCalculateHUM_PlotCalculateHUM_ROCCalculateHUM_seq
Dependencies:base64encbslibcachemclidigestevaluatefastmapfontawesomefsgluegtoolshighrhtmltoolshtmlwidgetsjquerylibjsonliteknitrlifecyclemagrittrmemoisemimeR6rappdirsRcpprglrlangrmarkdownsasstinytexxfunyaml
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| HUM calculation | HUM-package HUM |
| Calculate HUM value | CalcGene |
| Calculate ROC points | CalcROC |
| Plot the 3D-ROC curve | Calculate3D |
| Calculate HUM value | CalculateHUM_Ex |
| Plot 2D-ROC curve | CalculateHUM_Plot |
| Calculate HUM value | CalculateHUM_ROC |
| Calculate HUM value | CalculateHUM_seq |
| simulated data | dataset |
| desease data | sim |