Package: HDiR 1.1.3

Paula Saavedra-Nieves

HDiR: Directional Highest Density Regions

We provide an R tool for computation and nonparametric plug-in estimation of Highest Density Regions (HDRs) and general level sets in the directional setting. Concretely, circular and spherical HDRs can be reconstructed from a data sample following Saavedra-Nieves and Crujeiras (2021) <doi:10.1007/s11634-021-00457-4>. This library also contains two real datasets in the circular and spherical settings. The first one concerns a problem from animal orientation studies and the second one is related to earthquakes occurrences.

Authors:Paula Saavedra-Nieves [aut, cre], Rosa M Crujeiras [aut], Andrés Prieto [ctb], Felicita Scapini [dtc]

HDiR_1.1.3.tar.gz
HDiR_1.1.3.tar.gz(r-4.5-noble)HDiR_1.1.3.tar.gz(r-4.4-noble)
HDiR_1.1.3.tgz(r-4.4-emscripten)HDiR_1.1.3.tgz(r-4.3-emscripten)
HDiR.pdf |HDiR.html✨
HDiR/json (API)

# Install 'HDiR' in R:

install.packages('HDiR', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org'))

Datasets:

earthquakes - Earthquakes on Earth between October 2004 and April 2020
sandhoppers - Behavioral plasticity of Talitrus saltator and Talorchestia brito

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

1.00 score 1 scripts 268 downloads 26 exports 107 dependencies

Last updated 2 years agofrom:06ac93a18b. Checks:OK: 2. Indexed: yes.

Target	Result	Date
Doc / Vignettes	OK	Dec 05 2024
R-4.5-linux	OK	Dec 05 2024

Exports:cells10 cells20 cells40 circ.boot.bw circ.boot.sample circ.distances circ.hdr circ.plugin.hdr circ.scatterplot dspheremix find.circ.hdr is.wholenumber points10 points20 points40 rspheremix runif_on_sphere sphere.boot.bw sphere.boot.sample sphere.distances sphere.hdr sphere.integration sphere.plugin.hdr sphere.scatterplot trapezoidal.rule vmf.kerncontour2

Dependencies:askpass base64enc bigassertr bigparallelr bigstatsr bit Bolstad2 boot bslib cachem circular class classInt cli clue cluster codetools colorspace cowplot curl DBI digest Directional doParallel e1071 evaluate fansi farver fastmap ff flock fontawesome foreach fs ggplot2 glue gtable highr htmltools htmlwidgets httr isoband iterators jquerylib jsonlite KernSmooth knitr labeling lattice lifecycle magrittr MASS Matrix memoise mgcv mime misc3d movMF munsell mvtnorm nlme NPCirc openssl parallelly pillar pkgconfig plotrix proxy ps R6 rappdirs RColorBrewer Rcpp RcppArmadillo RcppEigen RcppGSL RcppParallel RcppZiggurat Rfast Rfast2 rgl RhpcBLASctl rlang rmarkdown rmio Rnanoflann rnaturalearth RSpectra s2 sass scales sf shape skmeans slam sys terra tibble tinytex units utf8 vctrs viridisLite withr wk xfun yaml

Help page	Topics
Circular smoothing parameter for HDRs estimation	circ.boot.bw
Euclidean and Hausdorff distances between two sets of points on the unit circle	circ.distances
Computation of HDRs for a circular density and of general level sets for circular real-valued functions	circ.hdr
Circular plug-in estimation of HDRs and confidence regions	circ.plugin.hdr
Circular scatterplot for plug-in HDRs	circ.scatterplot
Density functions for mixtures of spherical von Mises-Fisher	dspheremix
Earthquakes on Earth between October 2004 and April 2020	earthquakes
Random generation functions for mixtures of spherical von Mises-Fisher	rspheremix
Behavioral plasticity of Talitrus saltator and Talorchestia brito	sandhoppers
Spherical smoothing parameter for HDRs estimation	sphere.boot.bw
Euclidean and Hausdorff distances between two sets of points on the unit sphere	sphere.distances
Computation of HDRs for a spherical density and of general level sets for spherical real-valued functions	sphere.hdr
Spherical plug-in estimation of HDRs	sphere.plugin.hdr
Spherical scatterplot for plug-in HDRs	sphere.scatterplot

Package: HDiR 1.1.3

HDiR: Directional Highest Density Regions

Citation

Readme and manuals

Help Manual

Usage by other packages (reverse dependencies)