Package: GhostKnockoff 0.1.0

Zihuai He

GhostKnockoff: The Knockoff Inference Using Summary Statistics

Functions for multiple knockoff inference using summary statistics, e.g. Z-scores. The knockoff inference is a general procedure for controlling the false discovery rate (FDR) when performing variable selection. This package provides a procedure which performs knockoff inference without ever constructing individual knockoffs (GhostKnockoff). It additionally supports multiple knockoff inference for improved stability and reproducibility. Moreover, it supports meta-analysis of multiple overlapping studies.

Authors:Zihuai He <zihuai@stanford.edu>

GhostKnockoff_0.1.0.tar.gz
GhostKnockoff_0.1.0.tar.gz(r-4.5-noble)GhostKnockoff_0.1.0.tar.gz(r-4.4-noble)
GhostKnockoff_0.1.0.tgz(r-4.4-emscripten)GhostKnockoff_0.1.0.tgz(r-4.3-emscripten)
GhostKnockoff.pdf |GhostKnockoff.html✨
GhostKnockoff/json (API)

# Install 'GhostKnockoff' in R:
install.packages('GhostKnockoff', repos = 'https://cloud.r-project.org')

On CRAN:

Conda:r-ghostknockoff-0.1.0(2025-03-25)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

1.00 score 1 stars 163 downloads 5 exports 19 dependencies

Last updated 3 years agofrom:dfb8f695a4. Checks:3 OK. Indexed: yes.

TargetResultLatest binary
Doc / VignettesOKMar 15 2025
R-4.5-linuxOKMar 15 2025
R-4.4-linuxOKMar 15 2025

Exports:GhostKnockoff.filterGhostKnockoff.fitGhostKnockoff.GetCorStudyGhostKnockoff.prelimGhostKnockoff.prelim.Meta

Dependencies:bitbit64clicorpcorCVXRECOSolveRgmpgtoolslatticeMatrixosqpR6RcppRcppEigenRdsdpRmpfrRSpectrascsseqminer

Citation

To cite package ‘GhostKnockoff’ in publications use:

He Z (2021). GhostKnockoff: The Knockoff Inference Using Summary Statistics. R package version 0.1.0, https://CRAN.R-project.org/package=GhostKnockoff.

ATTENTION: This citation information has been auto-generated from the package DESCRIPTION file and may need manual editing, see ‘help("citation")’.

Corresponding BibTeX entry: 

  @Manual{,
    title = {GhostKnockoff: The Knockoff Inference Using Summary
      Statistics},
    author = {Zihuai He},
    year = {2021},
    note = {R package version 0.1.0},
    url = {https://CRAN.R-project.org/package=GhostKnockoff},
  }