Package: GeneScoreR 0.1.1
Aris Syntakas
GeneScoreR: Gene Scoring from Count Tables
Provides two methods for automatic calculation of gene scores from gene count tables: the z-score method, which requires a table of samples being scored and a count table with control samples, and the geometric mean method, which does not rely on control samples. The mathematical methods implemented are described by Kim et al. (2018) <doi:10.1089/jir.2017.0127>.
Authors:
GeneScoreR_0.1.1.tar.gz
GeneScoreR_0.1.1.tar.gz(r-4.5-noble)GeneScoreR_0.1.1.tar.gz(r-4.4-noble)
GeneScoreR_0.1.1.tgz(r-4.4-emscripten)GeneScoreR_0.1.1.tgz(r-4.3-emscripten)
GeneScoreR.pdf |GeneScoreR.html✨
GeneScoreR/json (API)
| # Install 'GeneScoreR' in R: |
| install.packages('GeneScoreR', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org')) |
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated 5 days agofrom:388932961f. Checks:OK: 2. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Oct 26 2024 |
| R-4.5-linux | OK | Oct 26 2024 |
Dependencies:
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Calculate Geometric Means from Count Tables | geomean |
| Calculate Z-Scores from Count Tables | zscore |
