Package: GeRnika 1.0.0
Aitor Sánchez-Ferrera
GeRnika: Simulation, Visualization and Comparison of Tumor Evolution Data
Simulating, visualizing and comparing tumor clonal data by using simple commands. This aims at providing a tool to help researchers to easily simulate tumor data and analyze the results of their approaches for studying the composition and the evolutionary history of tumors.
Authors:
GeRnika_1.0.0.tar.gz
GeRnika_1.0.0.tar.gz(r-4.5-noble)GeRnika_1.0.0.tar.gz(r-4.4-noble)
GeRnika_1.0.0.tgz(r-4.4-emscripten)GeRnika_1.0.0.tgz(r-4.3-emscripten)
GeRnika.pdf |GeRnika.html✨
GeRnika/json (API)
# Install 'GeRnika' in R: |
install.packages('GeRnika', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org')) |
- B_mats - A set of 10 trios of B matrices for experimenting with the methods of 'GeRnika'
- hyperparameters - Hyperparameters for the methods of 'GeRnika'
- palettes - Palettes for the methods of 'GeRnika'
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated 3 months agofrom:c6b0dedb26. Checks:OK: 2. Indexed: yes.
Target | Result | Date |
---|---|---|
Doc / Vignettes | OK | Dec 04 2024 |
R-4.5-linux | OK | Dec 04 2024 |
Exports:.distribute_freqsadd_noiseB_to_phylotreecalc_clone_proportionscombine_treescreate_Bcreate_instancecreate_phylotreecreate_Uequalsfind_common_subtreesphylotree_to_Bplace_clones_spaceplotplot_proportions
Dependencies:base64encbitbit64bslibcachemclicliprcolorspacecpp11crayondata.treeDiagrammeRdigestdplyrevaluatefansifarverfastmapfontawesomefsgenericsgluehighrhmshtmltoolshtmlwidgetsigraphjquerylibjsonliteknitrlabelinglatticelifecyclemagrittrMatrixmemoisemimemunsellpillarpkgconfigplyrprettyunitsprogresspurrrR6rappdirsRColorBrewerRcppreadrreshape2rlangrmarkdownrstudioapisassscalesstringistringrtibbletidyrtidyselecttinytextzdbutf8vctrsviridisLitevisNetworkvroomwithrxfunyaml