Package: GWASinlps 2.5

GWASinlps: Non-Local Prior Based Iterative Variable Selection Tool for Genome-Wide Association Studies
Performs variable selection with data from Genome-wide association studies (GWAS), or other high-dimensional data with continuous, binary or survival outcomes, combining in an iterative framework the computational efficiency of the structured screen-and-select variable selection strategy based on some association learning and the parsimonious uncertainty quantification provided by the use of non-local priors (see Sanyal et al., 2019 <doi:10.1093/bioinformatics/bty472>).
Authors:
GWASinlps_2.5.tar.gz
GWASinlps_2.5.zip(r-4.7-x86_64)GWASinlps_2.5.zip(r-4.7-arm64)GWASinlps_2.5.zip(r-4.6-x86_64)GWASinlps_2.5.zip(r-4.6-arm64)
GWASinlps_2.5.tar.gz(r-4.7-arm64)GWASinlps_2.5.tar.gz(r-4.7-x86_64)GWASinlps_2.5.tar.gz(r-4.6-arm64)GWASinlps_2.5.tar.gz(r-4.6-x86_64)
GWASinlps_2.5.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
GWASinlps/json (API)
| # Install 'GWASinlps' in R: |
| install.packages('GWASinlps', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/nilotpalsanyal/gwasinlps/issues
Pkgdown/docs site:https://nilotpalsanyal.github.io
Last updated from:aafc39c40e. Checks:10 OK. Indexed: no.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-arm64 | OK | 129 | ||
| linux-devel-x86_64 | OK | 167 | ||
| source / vignettes | OK | 242 | ||
| linux-release-arm64 | OK | 166 | ||
| linux-release-x86_64 | OK | 145 | ||
| windows-devel-arm64 | OK | 270 | ||
| windows-devel-x86_64 | OK | 192 | ||
| windows-release-arm64 | OK | 260 | ||
| windows-release-x86_64 | OK | 150 | ||
| wasm-release | OK | 116 |
Exports:GWASinlpsnlpsGLMnlpsLM
Dependencies:BHbigmemorybigmemory.sriclicodetoolscpp11dplyrfarverfastglmforeachFormulagenericsggplot2glmnetgluegtableintervalsisobanditeratorsL0LearnlabelinglatticelifecyclemagrittrMASSMatrixMatrixGenericsmatrixStatsmclustmgcvmodelSelectionmvtnormncvregnlmepillarpkgconfigplyrpracmaR6RColorBrewerRcppRcppArmadilloRcppEigenreshape2rlangS7scalesshapesparseMatrixStatsstringistringrsurvivaltibbletidyselectutf8uuidvctrsviridisLitewithr
