Package: GSMX 1.3
Zhenyu Jia
GSMX: Multivariate Genomic Selection
Estimating trait heritability and handling overfitting. This package includes a collection of functions for (1) estimating genetic variance-covariances and calculate trait heritability; and (2) handling overfitting by calculating the variance components and the heritability through cross validation.
Authors:
GSMX_1.3.tar.gz
GSMX_1.3.tar.gz(r-4.5-noble)GSMX_1.3.tar.gz(r-4.4-noble)
GSMX_1.3.tgz(r-4.4-emscripten)GSMX_1.3.tgz(r-4.3-emscripten)
GSMX.pdf |GSMX.html✨
GSMX/json (API)
| # Install 'GSMX' in R: |
| install.packages('GSMX', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org')) |
Datasets:
- pseudo.data - Pseudo dataset
- pseudo.kin - Pseudo kinship matrix
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated 7 years agofrom:d1dcff2c99. Checks:OK: 2. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Nov 20 2024 |
| R-4.5-linux | OK | Nov 20 2024 |
Exports:gsm
Dependencies:MASS
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Multivariate Genomic Selection | GSMX-package GSMX |
| Esimate genetic variance-covariances and calculate heritability and predictability using cross validation | gsm |
| Pseudo dataset | pseudo.data |
| Pseudo kinship matrix | pseudo.kin |