Overview | Data requirements | Covariates, case counts, and incidence rates | Spatial and temporal aggregations | Color palettes | Plot types | Time series | Dual-axis time series | Heatmap | Seasonality | Map | Bivariate | Correlation | Compare
Package: GHRexplore 0.2.2
Carles Milà
GHRexplore: Exploratory Analysis of Temporal and Spatio-Temporal Health Data
A collection of commonly used visualizations of temporal and spatio-temporal health data including case counts, incidence rates, and covariates. The available plot types include time series, heatmaps, seasonality plots, maps and more. The package supports standard data transformations such as temporal and spatial aggregations, while offering extensive customization options for the resulting figures.
Authors:
GHRexplore_0.2.2.tar.gz
GHRexplore_0.2.2.tar.gz(r-4.7-any)GHRexplore_0.2.2.tar.gz(r-4.6-any)
GHRexplore_0.2.2.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
GHRexplore/json (API)
| # Install 'GHRexplore' in R: |
| install.packages('GHRexplore', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/bsc-es/ghrtools/issues
Datasets:
Last updated from:2a0b31bc9e. Checks:4 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-x86_64 | OK | 204 | ||
| source / vignettes | OK | 254 | ||
| linux-release-x86_64 | OK | 190 | ||
| wasm-release | OK | 129 |
Exports:aggregate_casesaggregate_covdate_to_epiywepiyw_to_dateGHR_paletteGHR_palettesplot_bivariateplot_combineplot_compareplot_correlationplot_heatmapplot_mapplot_multipleplot_seasonalityplot_timeseriesplot_timeseries2
Dependencies:clicolorspacecowplotcpp11dplyrfarvergenericsggplot2gluegtableisobandlabelinglifecyclelubridatemagrittrpillarpkgconfigpurrrR6RColorBrewerrlangS7scalesstringistringrtibbletidyrtidyselecttimechangeutf8vctrsviridisLitewithr
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Aggregate cases | aggregate_cases |
| Aggregate covariates | aggregate_cov |
| Convert a date to epiyearweek format | date_to_epiyw |
| Dengue cases in _Mato Grosso do Sul_ | dengue_MS |
| Dengue cases in _Sao Paulo_ | dengue_SP |
| Convert a epiyearweek to date format | epiyw_to_date |
| Generate GHR color palettes | GHR_palette GHR_palettes |
| Municipality boundaries of _Mato Grosso do Sul_ | map_MS |
| Bivariate plot | plot_bivariate |
| Combine plots | plot_combine |
| Compare plots | plot_compare |
| Correlation plot | plot_correlation |
| Heatmap plot | plot_heatmap |
| Choropleth map | plot_map |
| Multiple plot | plot_multiple |
| Seasonality plot | plot_seasonality |
| Time series plot | plot_timeseries |
| Time series plot of two variables in two different axes | plot_timeseries2 |