Package: GEInfo 1.0

Xiaoyan Wang

GEInfo: Gene-Environment Interaction Analysis Incorporating Prior Information

Realize three approaches for Gene-Environment interaction analysis. All of them adopt Sparse Group Minimax Concave Penalty to identify important G variables and G-E interactions, and simultaneously respect the hierarchy between main G and G-E interaction effects. All the three approaches are available for Linear, Logistic, and Poisson regression. Also realize to mine and construct prior information for G variables and G-E interactions.

Authors:Xiaoyan Wang, Hongduo Liu, and Shuangge Ma

GEInfo_1.0.tar.gz
GEInfo_1.0.tar.gz(r-4.7-any)GEInfo_1.0.tar.gz(r-4.6-any)
GEInfo_1.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
GEInfo/json (API)

# Install 'GEInfo' in R:
install.packages('GEInfo', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org'))

On CRAN:

Conda:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

1.00 score 155 downloads 7 exports 45 dependencies

Last updated from:1b41bdf9e5. Checks:4 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64OK128
source / vignettesOK167
linux-release-x86_64OK123
wasm-releaseOK112

Exports:CGEInfocv.CGEInfocv.GEInfoGEInfomatWPubMed.searchTypeS

Dependencies:askpassclicodetoolscurldplyrfarverforeachgenericsglmnetgluegtablehttriteratorsjsonlitelabelinglatticelifecyclemagrittrMASSMatrixmimeopensslpheatmappillarpkgconfigR6RColorBrewerRcppRcppEigenrlangrvestscalesselectrshapestringistringrsurvivalsystibbletidyselectutf8vctrsviridisLitewithrxml2