Package: FLORAL 0.3.0

Teng Fei

FLORAL: Fit Log-Ratio Lasso Regression for Compositional Data

Log-ratio Lasso regression for continuous, binary, and survival outcomes with compositional features. See Fei and others (2023) <doi:10.1101/2023.05.02.538599>.

Authors:Teng Fei [aut, cre, cph], Tyler Funnell [aut], Nicholas Waters [aut], Sandeep Raj [aut]

FLORAL_0.3.0.tar.gz
FLORAL_0.3.0.tar.gz(r-4.5-noble)FLORAL_0.3.0.tar.gz(r-4.4-noble)
FLORAL_0.3.0.tgz(r-4.4-emscripten)FLORAL_0.3.0.tgz(r-4.3-emscripten)
FLORAL.pdf |FLORAL.html✨
FLORAL/json (API)
NEWS

# Install 'FLORAL' in R:
install.packages('FLORAL', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/vdblab/floral/issues

Pkgdown site:https://vdblab.github.io

Uses libs:
  • openblas– Optimized BLAS
  • c++– GNU Standard C++ Library v3
  • openmp– GCC OpenMP (GOMP) support library

openblascppopenmp

3.20 score 16 scripts 166 downloads 4 exports 97 dependencies

Last updated 4 months agofrom:ae03c5fabd. Checks:OK: 2. Indexed: no.

TargetResultDate
Doc / VignettesOKDec 19 2024
R-4.5-linux-x86_64OKDec 19 2024

Exports:a.FLORALFLORALmcv.FLORALsimu

Dependencies:ast2astbootstrapcaretclasscliclockcodetoolscolorspacecpp11crayondata.tabledfdrdiagramdigestdoParalleldoRNGdplyre1071expmfansifarverforeachfuturefuture.applygenericsggplot2glmnetglobalsgluegowergtablehardhatipredisobanditeratorsKernSmoothlabelinglatticelavalifecyclelistenvlobstrlubridatemagrittrMASSMatrixmgcvModelMetricsmsmmunsellmvtnormnlmennetnumDerivparallellypillarpkgconfigplyrprettyunitspROCprodlimprogressrproxypryrpurrrR6RColorBrewerRcppRcppArmadilloRcppEigenRcppProgressrecipesreshapereshape2rlangrmetarngtoolsrpartscalesshapeSQUAREMstringistringrSuppDistssurvcompsurvivalsurvivalROCtibbletidyrtidyselecttimechangetimeDatetzdbutf8vctrsviridisLitewithr

Using FLORAL for Microbiome Analysis

Rendered fromUsing-FLORAL-for-Microbiome-Analysis.Rmdusingknitr::rmarkdownon Dec 19 2024.

Last update: 2023-07-05
Started: 2023-05-11

Using FLORAL for survival models with longitudinal microbiome data

Rendered fromUsing-FLORAL-for-survival-models-with-longitudinal-microbiome-data.Rmdusingknitr::rmarkdownon Dec 19 2024.

Last update: 2024-08-21
Started: 2024-08-21