Package: EstMix 1.0.1
Xuan You
EstMix: Tumor Clones Percentage Estimations
Includes R functions for the estimation of tumor clones percentages for both snp data and (whole) genome sequencing data. See Cheng, Y., Dai, J. Y., Paulson, T. G., Wang, X., Li, X., Reid, B. J., & Kooperberg, C. (2017). Quantification of multiple tumor clones using gene array and sequencing data. The Annals of Applied Statistics, 11(2), 967-991, <doi:10.1214/17-AOAS1026> for more details.
Authors:
EstMix_1.0.1.tar.gz
EstMix_1.0.1.tar.gz(r-4.5-noble)EstMix_1.0.1.tar.gz(r-4.4-noble)
EstMix_1.0.1.tgz(r-4.4-emscripten)EstMix_1.0.1.tgz(r-4.3-emscripten)
EstMix.pdf |EstMix.html✨
EstMix/json (API)
# Install 'EstMix' in R: |
install.packages('EstMix', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org')) |
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated 6 years agofrom:1f28efc3a1. Checks:OK: 2. Indexed: yes.
Target | Result | Date |
---|---|---|
Doc / Vignettes | OK | Oct 12 2024 |
R-4.5-linux-x86_64 | OK | Oct 12 2024 |
Exports:calc_1dcalc_1d_wgscalc_2dcalc_2d_wgscalc_3dcalc_ncalcll_1d_bafcalcll_bafcalcll_cppcalcll_p1_cppcalcll_p3combine_close_segest_mixtureest_mixture_wgsf_bafget_segmentationget_var_tcn_bafmean2preprocessingsel_scale_1dsel_scale_1d_wgssel_scale_2dsel_scale_2d_wgs
Dependencies:aroma.lightcodetoolsdigestDNAcopyfutureglobalslistenvmatrixStatsparallellyPSCBSR.cacheR.methodsS3R.ooR.utilsRcppRcppArmadillo