Package: EMCluster 0.2-17
EMCluster: EM Algorithm for Model-Based Clustering of Finite Mixture Gaussian Distribution
EM algorithms and several efficient initialization methods for model-based clustering of finite mixture Gaussian distribution with unstructured dispersion in both of unsupervised and semi-supervised learning.
Authors:
EMCluster_0.2-17.tar.gz
EMCluster_0.2-17.tar.gz(r-4.7-arm64)EMCluster_0.2-17.tar.gz(r-4.7-x86_64)EMCluster_0.2-17.tar.gz(r-4.6-arm64)EMCluster_0.2-17.tar.gz(r-4.6-x86_64)
manual.pdf |manual.html✨
card.svg |card.png
EMCluster/json (API)
| # Install 'EMCluster' in R: |
| install.packages('EMCluster', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/snoweye/emcluster/issues
Last updated from:a402a474e1. Checks:5 OK, 1 FAIL. Indexed: no.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-arm64 | OK | 119 | ||
| linux-devel-x86_64 | OK | 126 | ||
| source / vignettes | OK | 170 | ||
| linux-release-arm64 | OK | 117 | ||
| linux-release-x86_64 | OK | 132 | ||
| wasm-release | FAIL | 103 |
Exports:.EMControlappend.BNassign.classassign.class.wtbh.fdrcheck.dimcheck.dim.wtclass2Gammaclass2Gamma.wtcreate.cexcreate.colorsdlmvndmixmvndmixmvn.wtdmvndraw.colorse.stepe.step.wtem.aicem.bicem.clcem.EMem.icem.iclem.icl.bicem.initem.Modelemclusteremcluster.wtemgroupemgroup.wtexhaust.EMfill.ppcontourfill.ppmufill.pppointsGamma2classGamma2class.wtGenDataSetGenMixDataSetget.cov.logit.PIget.cov.logit.zget.cov.paramget.cov.post.zget.E.chi2get.E.deltaget.logor.statgetlistGmatgridOneinit.EMIyIy2Jaccard.IndexlmtlogLlogL.wtLTsigma2varLTSigma2variancem.stepm.step.wtmatch.colcexmb.em.EMmb.rand.EMmeandispersionmy.catmy.formatmy.printpartial.f.mu.spartial.logit.ppartial.logLpartial.post.zpartial.post.z.1partial.qpchisq.myplot2dplotbarplotBNplotemplotlikeprobplotmdplotpplotppcontourplotptplotqpostPIprint.emretprint.initretprint.lmtprint.RRandretprint.summary.emretprint.summary.svdprint.svdproject.on.2dq.map.newrand.EMrecoderecolorrematchRRandshortemclustershortemcluster.wtsimple.initstarts.via.svdstarts.via.svd.wtsummary.emretsummary.emret.wtsummary.svdsummary.svd.wtvar2LTsigmavariance2LTSigmaw.2wt2wot
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| EM Algorithm for Model-Based Clustering of Finite Mixture Gaussian Distribution | EMCluster-package |
| Assign Class Id | assign.class |
| Convert Matrices in Different Format | class2Gamma Gamma2class LTsigma2var LTSigma2variance var2LTsigma variance2LTSigma |
| Dataset for demonstrations | da1 da2 da3 |
| EM Algorithm for model-based clustering | emcluster emobj object emret class shortemcluster simple.init |
| EM Control Generator and Controller | .EMC .EMC.Rnd .EMC.Rndp .EMControl |
| Information Criteria for Model-Based Clustering | em.aic em.bic em.clc em.ic em.icl em.icl.bic |
| Initialization and EM Algorithm | em.EM exhaust.EM init.EM rand.EM |
| Jaccard Index | Jaccard.Index |
| Likelihood Mixture Tests | lmt |
| Likelihood Mixture Test (LMT) Functions of EMCluster | bh.fdr col.ppcontour fill.ppcontour fill.ppmu fill.pppoints GenDataSet GenMixDataSet get.E.chi2 get.E.delta Gmat gridOne Iy Iy2 partial.logL partial.q pchisq.my plotp plotq postPI print.lmt q.map.new w.2 |
| Density of (Mixture) Multivariate Normal Distribution | dlmvn dmixmvn dmvn logL |
| Other Initializations | emgroup starts.via.svd |
| Plot Two Dimensional Data with clusters | plot2d plotem |
| Plot Multivariate Data | plotmd |
| Plot Contour | plotppcontour |
| Post I Information Functions of EMCluster | get.cov.logit.PI get.cov.logit.z get.cov.param get.cov.post.z get.logor.stat partial.f.mu.s partial.logit.p partial.post.z partial.post.z.1 |
| Functions for Printing or Summarizing Objects According to Classes | print.emret summary.emret summary.svd |
| Produce Projection on 2D | project.on.2d |
| Rand Index and Adjusted Rand Index | RRand |
| Recolor Classification IDs | recode recolor rematch |
| Single E- and M-step | e.step m.step |
