Package: EHR 0.4-11

Leena Choi

EHR: Electronic Health Record (EHR) Data Processing and Analysis Tool

Process and analyze electronic health record (EHR) data. The 'EHR' package provides modules to perform diverse medication-related studies using data from EHR databases. Especially, the package includes modules to perform pharmacokinetic/pharmacodynamic (PK/PD) analyses using EHRs, as outlined in Choi, Beck, McNeer, Weeks, Williams, James, Niu, Abou-Khalil, Birdwell, Roden, Stein, Bejan, Denny, and Van Driest (2020) <doi:10.1002/cpt.1787>. Additional modules will be added in future. In addition, this package provides various functions useful to perform Phenome Wide Association Study (PheWAS) to explore associations between drug exposure and phenotypes obtained from EHR data, as outlined in Choi, Carroll, Beck, Mosley, Roden, Denny, and Van Driest (2018) <doi:10.1093/bioinformatics/bty306>.

Authors:Leena Choi [aut, cre], Cole Beck [aut], Hannah Weeks [aut], Elizabeth McNeer [aut], Nathan James [aut], Michael Williams [aut]

EHR_0.4-11.tar.gz
EHR_0.4-11.tar.gz(r-4.5-noble)EHR_0.4-11.tar.gz(r-4.4-noble)
EHR_0.4-11.tgz(r-4.4-emscripten)EHR_0.4-11.tgz(r-4.3-emscripten)
EHR.pdf |EHR.html✨
EHR/json (API)

Peer review:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

33 exports 2.35 score 6 dependencies 11 mentions 55 scripts 428 downloads

Last updated 2 years agofrom:cc88321e28. Checks:OK: 1 WARNING: 1. Indexed: yes.

Exports:addLastDoseanalysisPheWASbuildDosecollapseDosedataTransformationextractMedfreqNumidCrosswalkLogistfmakeDoseparseCLAMPparseMedExparseMedExtractRparseMedXNprocessLastDosepullFakeIdpullRealIdreadTransformrun_Build_PK_IVrun_Build_PK_Oralrun_Demorun_DrugLevelrun_Labsrun_MedStrIrun_MedStrIIstdzDosestdzDoseChangestdzDoseSchedulestdzDurationstdzFreqstdzRoutestdzStrengthzeroOneTable

Dependencies:cpp11data.tablegenericslubridatepkdatatimechange