Package: D3GB 2.0

Carlos Prieto

D3GB: Interactive Genome Browser

Creates interactive genome browser. It joins the data analysis power of 'R' and the visualization libraries of 'JavaScript' in one package. Barrios, D. & Prieto, C. (2017) <doi:10.1089/cmb.2016.0213>.

Authors:Carlos Prieto [aut, cph, cre], David Barrios [aut]

D3GB_2.0.tar.gz
D3GB_2.0.tar.gz(r-4.5-noble)D3GB_2.0.tar.gz(r-4.4-noble)
D3GB_2.0.tgz(r-4.4-emscripten)D3GB_2.0.tgz(r-4.3-emscripten)
D3GB.pdf |D3GB.html✨
D3GB/json (API)

# Install 'D3GB' in R:
install.packages('D3GB', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

1.26 score 18 scripts 480 downloads 1 mentions 17 exports 17 dependencies

Last updated 5 months agofrom:f5def2fcb5. Checks:OK: 2. Indexed: yes.

TargetResultDate
Doc / VignettesOKOct 28 2024
R-4.5-linuxOKOct 28 2024

Exports:createAssemblygbk2genomebrowsergenome_addGFFgenome_addSequencegenome_addTrackgenome_addVCFgenome_createLocalModegenome_createServerModegenomebrowsergenomemapgetAssemblyFromFastaGRCh37GRCh37.bandsGRCh38GRCh38.bandsNCBI36segmentation

Dependencies:base64encbitbit64blobcachemclicpp11DBIfastmapgluelifecyclememoisepkgconfigplogrrlangRSQLitevctrs