Package: CompClassMetrics 1.0.1

Nan Nan

CompClassMetrics: Classification Measures when Subclasses are Involved

Accuracy metrics are commonly used to assess the discriminating ability of diagnostic tests or biomarkers. Among them, metrics based on the ROC framework are particularly popular. When classification involves subclasses, the package 'CompClassMetrics' includes functions that can provide the point estimate, confidence interval as well as true values if a parametric setting is known. For more details see Nan and Tian (2025) <doi:10.1177/09622802251343600>, Nan and Tian (2023) <doi:10.1002/sim.9908>, Feng and Tian (2020) <doi:10.1177/0962280220938077> and Wang et al (2016) <doi:10.1002/sim.6843>.

Authors:Nan Nan [aut, cre]

CompClassMetrics_1.0.1.tar.gz
CompClassMetrics_1.0.1.tar.gz(r-4.7-any)CompClassMetrics_1.0.1.tar.gz(r-4.6-any)
CompClassMetrics_1.0.1.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
CompClassMetrics/json (API)

# Install 'CompClassMetrics' in R:
install.packages('CompClassMetrics', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org'))
Datasets:

On CRAN:

Conda:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

1.48 score 220 downloads 18 exports 5 dependencies

Last updated from:146a888745. Checks:4 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64OK117
source / vignettesOK151
linux-release-x86_64OK118
wasm-releaseOK109

Exports:auco_funccdf_min_given_max_partial_uppercdf_min_max_partialcdf_order_rCI.funccvus_funcf_order_maxf_order_minget_max_min_permutationshumc_dynamichumc_fourclasshumc_minhumc_npcihumc_standardrocc_curverocc_curve_emprocc_surfacerocc_surface_emp

Dependencies:cubaturemisc3dplot3DpracmaRcpp

Readme and manuals

Help Manual

Help pageTopics
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R function that calculates the true values of AUCo when distribution is knownauco_func
R function that calculates the conditional probability of minimum greater than y_min given maximum equals to y_max of random variables (upper tail probability of minimum given maximum)cdf_min_given_max_partial_upper
R function that calculates the partial of joint probability of min and max over max of NIND random variablescdf_min_max_partial
R function that calculates the probability of r-th order statistics of normal random variables (CDF of r-th order statistics)cdf_order_r
R function that calculates percentile confidence interval given an array of estimatesCI.func
R function that calculates the true values of VUSC when distribution is knowncvus_func
R function that calculates the probability density of maximum of NIND random variables (PDF)f_order_max
R function that calculates the probability density of minimum of NIND random variables (PDF)f_order_min
R function for obtaining all combinations of maximum and minimum of a given datasetget_max_min_permutations
R function that calculates empirical estimates of HUMcmhumc_dynamic
R function that calculates the true values of HUMcm when distribution is knownhumc_fourclass
R function that calculates the minimum of HUMcm under given structurehumc_min
R function that calculates non-parametric bootstrap percentile confidence intervalhumc_npci
R function to calculate the standardized HUMcm under given structurehumc_standard
PLCOplco
R function for plotting the overall ROC curve and chance curverocc_curve
R function for plotting the empirical compound ROC curve and chance curverocc_curve_emp
R function for plotting the compound ROC surface and chance surfacerocc_surface
R function for plotting the empirical compound ROC surface and chance surfacerocc_surface_emp