Package: CohortGenerator 0.11.2
Anthony Sena
CohortGenerator: Cohort Generation for the OMOP Common Data Model
Generate cohorts and subsets using an Observational Medical Outcomes Partnership (OMOP) Common Data Model (CDM) Database. Cohorts are defined using 'CIRCE' (<https://github.com/ohdsi/circe-be>) or SQL compatible with 'SqlRender' (<https://github.com/OHDSI/SqlRender>).
Authors:
CohortGenerator_0.11.2.tar.gz
CohortGenerator_0.11.2.tar.gz(r-4.5-noble)CohortGenerator_0.11.2.tar.gz(r-4.4-noble)
CohortGenerator_0.11.2.tgz(r-4.4-emscripten)CohortGenerator_0.11.2.tgz(r-4.3-emscripten)
CohortGenerator.pdf |CohortGenerator.html✨
CohortGenerator/json (API)
NEWS
# Install 'CohortGenerator' in R: |
install.packages('CohortGenerator', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/ohdsi/cohortgenerator/issues
Pkgdown:https://ohdsi.github.io
Last updated 2 months agofrom:89f9d8ecc5. Checks:OK: 1 WARNING: 1. Indexed: no.
Target | Result | Date |
---|---|---|
Doc / Vignettes | OK | Oct 31 2024 |
R-4.5-linux | WARNING | Oct 31 2024 |
Exports:addCohortSubsetDefinitioncheckAndFixCohortDefinitionSetDataTypesCohortSubsetDefinitionCohortSubsetOperatorcomputeChecksumcreateCohortSubsetcreateCohortSubsetDefinitioncreateCohortTablescreateDemographicSubsetcreateEmptyCohortDefinitionSetcreateEmptyNegativeControlOutcomeCohortSetcreateLimitSubsetcreateResultsDataModelcreateSubsetCohortWindowDemographicSubsetOperatordropCohortStatsTablesexportCohortStatsTablesgenerateCohortSetgenerateNegativeControlOutcomeCohortsgetCohortCountsgetCohortDefinitionSetgetCohortInclusionRulesgetCohortStatsgetCohortTableNamesgetDataMigratorgetRequiredTasksgetResultsDataModelSpecificationsgetSubsetDefinitionsinsertInclusionRuleNamesisCamelCaseisCohortDefinitionSetisFormattedForDatabaseUploadisSnakeCaseisTaskRequiredLimitSubsetOperatormigrateDataModelreadCsvrecordTasksDonerunCohortGenerationsampleCohortDefinitionSetsaveCohortDefinitionSetsaveCohortSubsetDefinitionsaveIncrementalSubsetCohortWindowSubsetOperatoruploadResultswriteCsv
Dependencies:backportsbitbit64blobcheckmateclicliprcpp11crayonDatabaseConnectorDBIdbplyrdigestdplyrfansifastmapgenericsgluehmsjsonlitelaterlifecyclelubridatemagrittrParallelLoggerpillarpkgconfigpoolprettyunitsprogresspurrrR6RcppreadrResultModelManagerrJavaRJSONIOrlangsnowSqlRenderstringistringrtibbletidyrtidyselecttimechangetriebeardtzdburltoolsutf8vctrsvroomwithrxml2zip
Creating Cohort Subset Definitions
Rendered fromCreatingCohortSubsetDefinitions.Rmd
usingknitr::rmarkdown
on Oct 31 2024.Last update: 2024-10-01
Started: 2024-09-16
Generating Cohorts
Rendered fromGeneratingCohorts.Rmd
usingknitr::rmarkdown
on Oct 31 2024.Last update: 2024-10-01
Started: 2024-09-16
Sampling Cohorts
Rendered fromSamplingCohorts.Rmd
usingknitr::rmarkdown
on Oct 31 2024.Last update: 2024-10-01
Started: 2024-09-16