Package: CirceR 1.3.3
Chris Knoll
CirceR: Construct Cohort Inclusion and Restriction Criteria Expressions
Wraps the 'CIRCE' (<https://github.com/ohdsi/circe-be>) 'Java' library allowing cohort definition expressions to be edited and converted to 'Markdown' or 'SQL'.
Authors:
CirceR_1.3.3.tar.gz
CirceR_1.3.3.tar.gz(r-4.5-noble)CirceR_1.3.3.tar.gz(r-4.4-noble)
CirceR_1.3.3.tgz(r-4.4-emscripten)CirceR_1.3.3.tgz(r-4.3-emscripten)
CirceR.pdf |CirceR.html✨
CirceR/json (API)
NEWS
| # Install 'CirceR' in R: |
| install.packages('CirceR', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/ohdsi/circer/issues
Datasets:
- cohortDefinitionJson - An example cohort definition
- conceptSetJson - An example concept set
- conceptSetListJson - An example concept set list
Last updated 6 months agofrom:31eea9244b. Checks:OK: 2. Indexed: no.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Oct 16 2024 |
| R-4.5-linux | OK | Oct 16 2024 |
Exports:buildCohortQuerybuildConceptSetQuerycohortExpressionFromJsoncohortPrintFriendlyconceptSetExpressionFromJsonconceptSetListPrintFriendlyconceptSetPrintFriendlycreateGenerateOptions
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Build cohort SQL | buildCohortQuery |
| Build conceptset SQL | buildConceptSetQuery |
| An example cohort definition | cohortDefinitionJson |
| Render read JSON into a CohortExpression instance | cohortExpressionFromJson |
| Render cohort print-friendly | cohortPrintFriendly |
| Render read JSON into a ConceptSetExpression instance | conceptSetExpressionFromJson |
| An example concept set | conceptSetJson |
| An example concept set list | conceptSetListJson |
| Render conceptSet array for print-friendly | conceptSetListPrintFriendly |
| Render conceptSet array for print-friendly | conceptSetPrintFriendly |
| Create Generation Options | createGenerateOptions |
