Package: BinaryEPPM 3.0
David M. Smith
BinaryEPPM: Mean and Scale-Factor Modeling of Under- And Over-Dispersed Binary Data
Under- and over-dispersed binary data are modeled using an extended Poisson process model (EPPM) appropriate for binary data. A feature of the model is that the under-dispersion relative to the binomial distribution only needs to be greater than zero, but the over-dispersion is restricted compared to other distributional models such as the beta and correlated binomials. Because of this, the examples focus on under-dispersed data and how, in combination with the beta or correlated distributions, flexible models can be fitted to data displaying both under- and over-dispersion. Using Generalized Linear Model (GLM) terminology, the functions utilize linear predictors for the probability of success and scale-factor with various link functions for p, and log link for scale-factor, to fit a variety of models relevant to areas such as bioassay. Details of the EPPM are in Faddy and Smith (2012) <doi:10.1002/bimj.201100214> and Smith and Faddy (2019) <doi:10.18637/jss.v090.i08>.
Authors:
BinaryEPPM_3.0.tar.gz
BinaryEPPM_3.0.tar.gz(r-4.5-noble)BinaryEPPM_3.0.tar.gz(r-4.4-noble)
BinaryEPPM_3.0.tgz(r-4.4-emscripten)BinaryEPPM_3.0.tgz(r-4.3-emscripten)
BinaryEPPM.pdf |BinaryEPPM.html✨
BinaryEPPM/json (API)
# Install 'BinaryEPPM' in R: |
install.packages('BinaryEPPM', repos = c('https://cran.r-universe.dev', 'https://cloud.r-project.org')) |
- Berkshires.litters - The data are of the number of male piglets born in litters of varying sizes for the Berkshire breed of pigs.
- KupperHaseman.case - Kupper and Haseman example data
- Parkes.litters - The data are of the number of male piglets born in litters of varying sizes for the Parkes breed of pigs.
- Yorkshires.litters - The data are of the number of male piglets born in litters of varying sizes for the Yorkshire breed of pigs.
- ropespores.case - Dilution series for the presence of rope spores.
- ropespores.grouped - Dilution series for the presence of rope spores.
- wordcount.case - Number of occurences of an article in five-word and ten-word samples from two authors.
- wordcount.grouped - Number of occurences of an article in five-word and ten-word samples from two authors.
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated 7 months agofrom:3e932ad744. Checks:OK: 2. Indexed: yes.
Target | Result | Date |
---|---|---|
Doc / Vignettes | OK | Dec 02 2024 |
R-4.5-linux | OK | Dec 02 2024 |
Exports:BBprobBinaryEPPMCBprobcoef.BinaryEPPMcooks.distance.BinaryEPPMdoubexpdoubrecipEPPMprobfitted.BinaryEPPMGBprobhatvalues.BinaryEPPMLL.gradientLL.Regression.BinarylogLik.BinaryEPPMloglogModel.BCBinProbModel.BinaryModel.GBModel.JMVGBnegcomplogplot.BinaryEPPMpowerlogitpredict.BinaryEPPMprint.BinaryEPPMprint.summaryBinaryEPPMresiduals.BinaryEPPMsummary.BinaryEPPMvcov.BinaryEPPMwaldtest.BinaryEPPM